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gwa2_scaffold_3346_9

Organism: GWA2_OD1-rel_38_13

near complete RP 41 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: comp(6205..7113)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 293.0
  • Bit_score: 216
  • Evalue 1.30e-53
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KKQ56874.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 302.0
  • Bit_score: 594
  • Evalue 1.10e-166
3-hydroxybutyryl-CoA dehydrogenase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 215
  • Evalue 1.00e+00

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Notes

benzoate degradation via coa ligation and butanoate metabolism. but also hits to 3-hydroxyacyl-CoA dehydrogenase. need confirmation Cindy Castelle (5/16/16)

Taxonomy

Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGGATTTAAAGAACATAGAAACGGTTGGCGTTGTCGGCGCCGGAACAATGGGTTCCGGAATTGCCCAGGTTTTCGCAGAAGCGGGATTTACGGTTTATCTTATAGACGAAACGTATGAAAAAGCCACGGAAGGAAAAAGAAAAATCGTGGAGAGGTTGCAAAAATCTTTAAAAAAACAATGCAATGAGAATGAAAACATATCCTCGTCTGCAATAAACAATATGAACAGTATTTTACTTAACATAACCCCTCTCAAACTAGAAGACTTAATATTCGTTCAAAAACCCCAATTATTCATTGAAGCGGTTTTTGAAGACCTGAAAACAAAACAAACGGTTTTCCGCGAATTAGACCGCCTATGCGGACCGGATACGATTTTAACAACAAACACTTCATCTATATCAATCTGGGACATAAGCAAAGCCGTAACCAATACGCGAAAATCAAAAATTATAGGTATGCACTTTATGAATCCGCCCTACATTCTAAAATTACTGGAAATCATAAAAAGCGACCGCACTTCCGATGAAACATATAGTATTGTTCAAGGACTTGCTAAAAGATTAAATAGAGAGCCGATTTTAACATCAATGGACAGGCCCGGATTTTTATGCAATAGAATACTAATGCCATCTATCCTGGAAGCATTGCGAACACTAGAGGAAAATGTCGGCAATGTTGAAGATATTGACCTGTCCGTTAAAACAGGGGTTGCCGGAGCTATGGATATTCTAAAACTCGGCGATTTAATCGGCTGGGATGTAGTATTAAATATAGTAGGCGTTCTACATGAAGCCCATGGCTCTCGCTATGAACCGCCTCATATTCTGCGCAATTTGGTCCGAGATGGATTTCTTGGTCGAAAAGTAAAAAAAGGAATTTTTGACTTTTACAGGAAGGAAAAATAG
PROTEIN sequence
Length: 303
MDLKNIETVGVVGAGTMGSGIAQVFAEAGFTVYLIDETYEKATEGKRKIVERLQKSLKKQCNENENISSSAINNMNSILLNITPLKLEDLIFVQKPQLFIEAVFEDLKTKQTVFRELDRLCGPDTILTTNTSSISIWDISKAVTNTRKSKIIGMHFMNPPYILKLLEIIKSDRTSDETYSIVQGLAKRLNREPILTSMDRPGFLCNRILMPSILEALRTLEENVGNVEDIDLSVKTGVAGAMDILKLGDLIGWDVVLNIVGVLHEAHGSRYEPPHILRNLVRDGFLGRKVKKGIFDFYRKEK*