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gwa2_scaffold_3346

Alias: GWA2_CP_megabin_Ab397_124

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_3346_1

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2..319
DNA (318bp) protein (106aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56866.1}; Flags: Fragment;; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3346_2

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740..1459
DNA (720bp) protein (240aa)
Regulatory protein, MerR {ECO:0000313|EMBL:KKQ56867.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Regulatory protein, MerR
gwa2_scaffold_3346_3

Not on your lists

1483..1782
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56868.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_3346_4

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1941..3266
DNA (1326bp) protein (442aa)
HI0933 family protein {ECO:0000313|EMBL:KKQ56869.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
HI0933 family protein
gwa2_scaffold_3346_5

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3352..4494
DNA (1143bp) protein (381aa)
AAA ATPase central domain protein {ECO:0000313|EMBL:KKQ56870.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
recombination factor protein RarA
AAA ATPase central domain protein
gwa2_scaffold_3346_6

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4571..5026
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56871.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3346_7

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comp(5084..5302)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56872.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_3346_8

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comp(5315..6202)
DNA (888bp) protein (296aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:KKQ56873.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Short chain enoyl-CoA hydratase
gwa2_scaffold_3346_9

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comp(6205..7113)
DNA (909bp) protein (303aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KKQ56874.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
3-hydroxybutyryl-CoA dehydrogenase
benzoate degradation via coa ligation and butanoate metabolism. but also hits to 3-hydroxyacyl-CoA dehydrogenase. need confirmation Cindy Castelle (5/16/16)
gwa2_scaffold_3346_10

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comp(7257..8138)
DNA (882bp) protein (294aa)
2,3-dimethylmalate lyase (EC:4.1.3.32)
2-methylisocitrate lyase {ECO:0000313|EMBL:KKQ56875.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
2-methylisocitrate lyase
propanoate, 4.2.1.79 Jill Banfield (4/25/16)
gwa2_scaffold_3346_11

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comp(8125..9561)
DNA (1437bp) protein (479aa)
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase {ECO:0000313|EMBL:KKQ56876.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
2-methylcitrate dehydratase
Propanoate 4.2.1.99 (sequential steps) Jill Banfield (4/25/16)
gwa2_scaffold_3346_12

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comp(9563..10687)
DNA (1125bp) protein (375aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.5)
Citrate synthase {ECO:0000313|EMBL:KKQ56877.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Citrate synthase
Citrate synthase, C-terminal domain Jill Banfield (10/25/17)
gwa2_scaffold_3346_13

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10883..12181
DNA (1299bp) protein (433aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:KKQ56878.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
acyl-CoA dehydrogenase
Glutaryl-CoA dehydrogenase
Fatty acid / lysine / benozate degradation etc. EC 1.3.8.6 Jill Banfield (5/11/16)
gwa2_scaffold_3346_14

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12195..13067
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56879.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3346_15

Not on your lists

comp(13181..14344)
DNA (1164bp) protein (388aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.3)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KKQ56880.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
acyl-CoA dehydrogenase
gwa2_scaffold_3346_16

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comp(14356..14853)
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56881.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_3346_17

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comp(14864..16138)
DNA (1275bp) protein (425aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KKQ56882.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase
gwa2_scaffold_3346_18

Not on your lists

comp(16147..18159)
DNA (2013bp) protein (671aa)
Acetyl-CoA synthetase (Acs-4) {ECO:0000313|EMBL:KKQ56883.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
acs-4; acetyl-CoA synthetase
Acetyl-CoA synthetase (Acs-4)
gwa2_scaffold_3346_19

Not on your lists

comp(18302..19189)
DNA (888bp) protein (296aa)
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:KKQ56884.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/isomerase
gwa2_scaffold_3346_20

Not on your lists

comp(19227..20156)
DNA (930bp) protein (310aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000313|EMBL:KKQ56885.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase
gwa2_scaffold_3346_21

Not on your lists

comp(20164..21126)
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56886.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_3346_22

Not on your lists

21367..22929
DNA (1563bp) protein (521aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:KKQ56887.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Methylmalonyl-CoA mutase, large subunit
gwa2_scaffold_3346_23

Not on your lists

22942..24090
DNA (1149bp) protein (383aa)
Methylmalonyl-coa mutase {ECO:0000313|EMBL:KKQ56888.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
B12 binding domain / kinase domain / Methylmalonyl-CoA mutase
methylmalonyl-coa mutase
gwa2_scaffold_3346_24

Not on your lists

24087..24836
DNA (750bp) protein (250aa)
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:KKQ56889.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
electron transfer flavoprotein subunit alpha/beta
Electron transfer flavoprotein alpha/beta-subunit
No OD1 hits in NCBI - best hits are all very distant Jill Banfield (5/11/16)
gwa2_scaffold_3346_25

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24839..25828
DNA (990bp) protein (330aa)
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:KKQ56890.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha/beta-subunit
gwa2_scaffold_3346_26

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25831..27057
DNA (1227bp) protein (409aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:KKQ56891.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
3-ketoacyl-CoA thiolase
gwa2_scaffold_3346_27

Not on your lists

comp(27126..28985)
DNA (1860bp) protein (620aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56892.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
hypothetical protein
Putative uncharacterized protein
FeS oxidoreductase likely involved in transferring electrons from intermediates during fatty acid oxidation to the ETC Cindy Castelle (5/11/16)
gwa2_scaffold_3346_28

Not on your lists

comp(29073..30086)
DNA (1014bp) protein (338aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56893.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Putative uncharacterized protein
gwa2_scaffold_3346_29

Not on your lists

comp(30115..31767)
DNA (1653bp) protein (551aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56894.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
gwa2_scaffold_3346_30

Not on your lists

comp(31895..32614)
DNA (720bp) protein (240aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:KKQ56895.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Deoxyribose-phosphate aldolase
Displaying items 1-30 of 50 in total

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