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gwa2_scaffold_3346_33

Organism: GWA2_OD1-rel_38_13

near complete RP 41 / 55 BSCG 45 / 51 ASCG 9 / 38 MC: 1
Location: 34437..35126

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c class I {ECO:0000313|EMBL:KKQ56898.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;" UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 229.0
  • Bit_score: 477
  • Evalue 8.70e-132
cytochrome c class I KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 221.0
  • Bit_score: 138
  • Evalue 2.50e-30
Cytochrome c class I similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 137
  • Evalue 3.00e+00

Lists

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Notes

Membrane-bound/NorC subunit of Nitric-oxide reductase Cindy Castelle (4/27/16)
Two CxxCH motifs. NCBI domains w. weak hits include (not best): Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]; Alt is SoxX but poor hits overall. Swiss pro suggests: Thiosulfate dehydrogenase! Jill Banfield (4/25/16)

Taxonomy

Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGAAAGAAAAATACCTTTGGTTGTGGTTTATTTTACCGACATTGATTAGCGCGGCGGTCTTGGTCGGATTATTAAAGCATTCTATAAAAGAAATTCCGATAAGAACAAATGCCGATTTGTTGACAGAAAAAGTGGTGGCGGGAAAAGTGGCGTTGCAAAAATATAATTGCAATGACTGCCATACTTTTTTTGGTATCGGTGGTTACTACGCGCCGGATTTGACCAAAATTTATAGAAAATACGGAGATGGTGGCAGGGAATTGTTAAAGGATGTTATTTTAAATCCTGAAAAACATTTTACCGGCAGAAGAATGAAAAAATTTAATATTACCGATAGCGAGATTGAGGCAATGATGGATTATTTGCGCTGGACGAGCAATATTAATAATAACGATTGGCCGCCGGTTTATTCTGAAAAATATGGAAGAAAAGGCAATGGCGGCAGTAATTTACTAAAAGCTAAAAAATGTTTGTTGTGTCATAGGTATAATGGAGAAGGCGGTGGCGCTGGTCCCGCGTTAAGTGCGGATTTTATTAGGAAAAGTTTTGACAGCAAGGATTCTTTAAGAAAATTTATAATAAATCCGCAATCCGGCAATAAAGATTCCCTTATGCTCCCATACGGCGGCGCTGAATTTACAGAAAAGGAGTTGGATGATTTGGTTAAATTTTTATGGGAGGGCAGATGA
PROTEIN sequence
Length: 230
VKEKYLWLWFILPTLISAAVLVGLLKHSIKEIPIRTNADLLTEKVVAGKVALQKYNCNDCHTFFGIGGYYAPDLTKIYRKYGDGGRELLKDVILNPEKHFTGRRMKKFNITDSEIEAMMDYLRWTSNINNNDWPPVYSEKYGRKGNGGSNLLKAKKCLLCHRYNGEGGGAGPALSADFIRKSFDSKDSLRKFIINPQSGNKDSLMLPYGGAEFTEKELDDLVKFLWEGR*