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gwa2_scaffold_140

Alias: zPERA2_38_36_4

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Displaying items 1-30 of 104 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_140_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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267..929
DNA (663bp) protein (221aa)
30S ribosomal protein S6 n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJB1_9FIRM
Ribosomal protein S6, small subunit ribosomal protein S6 {ECO:0000313|EMBL:KKR04676.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
rpsF; ribosomal protein S6
coiled-coil (db=Coil db_id=coil from=109 to=138 evalue=NA)
gwa2_scaffold_140_2
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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936..1370
DNA (435bp) protein (145aa)
single-strand binding protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262577A
Single-strand DNA-binding protein, single-strand DNA-binding protein {ECO:0000313|EMBL:KKR04675.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC
hypothetical protein
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=143 evalue=1.3e-31 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
gwa2_scaffold_140_3
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


1432..1644
DNA (213bp) protein (71aa)
Ribosomal protein S18 n=1 Tax=sediment metagenome RepID=D9PJ92_9ZZZZ
Ribosomal protein S18 {ECO:0000313|EMBL:KKQ71768.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
30S ribosomal protein S18
Ribosomal protein S18 (db=superfamily db_id=SSF46911 from=1 to=69 evalue=1.6e-18 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_140_4
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(1713..2600)
DNA (888bp) protein (296aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=118 to=129)
gwa2_scaffold_140_5
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(2631..3227)
DNA (597bp) protein (199aa)
Tax=zPERA2_38_36
gwa2_scaffold_140_6
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(3247..3708)
DNA (462bp) protein (154aa)
Tax=zPERA2_38_36
gwa2_scaffold_140_7
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

3833..6214
DNA (2382bp) protein (794aa)
Phosphoribosylformylglycinamidine synthase 2 n=8 Tax=Legionella pneumophila RepID=G8UV64_LEGPN rbh
Phosphoribosylformylglycinamidine synthase 2 Tax=zPERA2_38_36
purL; phosphoribosylformylglycinamidine synthase II (FGAM synthase II)
seg (db=Seg db_id=seg from=373 to=384)
gwa2_scaffold_140_8
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(6231..7505)
DNA (1275bp) protein (425aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=260 to=278)
gwa2_scaffold_140_9
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

7575..8690
DNA (1116bp) protein (372aa)
Gamma-glutamyl kinase, glutamate 5-kinase {ECO:0000313|EMBL:KKR04668.1}; EC=2.7.2.11 {ECO:0000313|EMBL:KKR04668.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bac
ProB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D411_PELTS
GLUTAMATE_5_KINASE (db=PatternScan db_id=PS00902 from=209 to=226 evalue=0.0 interpro_id=IPR019797 interpro_description=Glutamate 5-kinase, conserved site GO=Molecular Function: glutamate 5-kinase activity (GO:0004349), Biological Process: proline biosynthetic process (GO:0006561))
gwa2_scaffold_140_10
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(8717..9637)
DNA (921bp) protein (307aa)
Prophage antirepressor n=1 Tax=Anaerococcus tetradius ATCC 35098 RepID=C2CHI4_9FIRM
Prophage antirepressor Tax=zPERA2_38_36
hypothetical protein
(db=HMMPfam db_id=PF02498 from=15 to=134 evalue=4.3e-06 interpro_id=IPR003497 interpro_description=BRO N-terminal domain)
gwa2_scaffold_140_11
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

9807..10079
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJA7_THEM4
Uncharacterized protein {ECO:0000313|EMBL:KKQ71776.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
hypothetical protein
(db=HMMPfam db_id=PF02583 from=3 to=84 evalue=8.9e-18 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
gwa2_scaffold_140_12
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

10111..11457
DNA (1347bp) protein (449aa)
Heavy metal transport/detoxification protein n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KJ73_CLOPH
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:KKR04665.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
gwa2_scaffold_140_13
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

11469..13802
DNA (2334bp) protein (778aa)
copper-translocating P-type ATPase n=1 Tax=Acetivibrio cellulolyticus CD2 RepID=UPI0001E2F091 rbh
Copper-translocating P-type ATPase {ECO:0000313|EMBL:KKQ71778.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=524 to=545 evalue=NA)
gwa2_scaffold_140_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

13918..15420
DNA (1503bp) protein (501aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR04663.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwa2_scaffold_140_15
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

15537..17126
DNA (1590bp) protein (530aa)
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Flexistipes sinusarabici DSM 4947 RepID=F8E4H8_FLESM rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000313|EMBL:KKQ71780.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
seg (db=Seg db_id=seg from=83 to=94)
gwa2_scaffold_140_16
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

17130..17960
DNA (831bp) protein (277aa)
Tax=zPERA2_38_36
gwa2_scaffold_140_17
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

18268..18516
DNA (249bp) protein (83aa)
Tax=zPERA2_38_36
gwa2_scaffold_140_18
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

18513..18785
DNA (273bp) protein (91aa)
Plasmid stabilization system n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FRX3_METHJ
Plasmid stabilization system Tax=zPERA2_38_36
plasmid stabilization system protein
RelE_StbE: addiction module toxin, RelE/Stb (db=HMMTigr db_id=TIGR02385 from=5 to=88 evalue=0.00059 interpro_id=IPR012753 interpro_description=Addiction module toxin, RelE/StbE)
gwa2_scaffold_140_19
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(18795..19013)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Salimicrobium sp. MJ3 RepID=K2GNT0_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KKR04658.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
gwa2_scaffold_140_20
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(19067..19693)
DNA (627bp) protein (209aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=46 to=57)
gwa2_scaffold_140_21
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

19831..20847
DNA (1017bp) protein (339aa)
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=Thermococcus barophilus MP RepID=F0LLH7_THEBM rbh
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase Tax=zPERA2_38_36
phosphoribosylaminoimidazolecarboxamide formyltransferase
(db=HMMPfam db_id=PF06973 from=168 to=337 evalue=2.8e-70 interpro_id=IPR009720 interpro_description=IMP biosynthesis enzyme PurP, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ATP binding (GO:0005524), Biological Process: IMP biosynthetic process (GO:0006188), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
gwa2_scaffold_140_22
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

20888..21451
DNA (564bp) protein (188aa)
Putative domain HDIG-containing protein n=1 Tax=Marinitoga piezophila KA3 RepID=H2J324_MARPK
Uncharacterized protein {ECO:0000313|EMBL:KKR04655.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
(db=HMMPfam db_id=PF01966 from=22 to=95 evalue=4.4e-08 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
gwa2_scaffold_140_23
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

21464..22660
DNA (1197bp) protein (399aa)
Putative 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase n=1 Tax=uncultured archaeon RepID=D1JFK2_9ARCH rbh
5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein, 5-formaminoimidazole-4-carboxamide-1-(Beta)-D-ribofuranosyl 5'-monophosphate synthetase {ECO:00003
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
(db=HMMPfam db_id=PF06973 from=212 to=398 evalue=1.0e-62 interpro_id=IPR009720 interpro_description=IMP biosynthesis enzyme PurP, C-terminal GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ATP binding (GO:0005524), Biological Process: IMP biosynthetic process (GO:0006188), Molecular Function: ligase activity, forming carbon-nitrogen bonds (GO:0016879))
gwa2_scaffold_140_24
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(22672..23142)
DNA (471bp) protein (157aa)
Fis family two component sigma54 specific transcriptional regulator n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T2E3_9GAMM
Fis family two component sigma54 specific transcriptional regulator Tax=zPERA2_38_36
no description (db=HMMSmart db_id=SM00448 from=38 to=146 evalue=0.0084 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=35 to=151 evalue=1.0e-08)
gwa2_scaffold_140_25
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

23315..24646
DNA (1332bp) protein (444aa)
Glucose-1-phosphate thymidylyltransferase, bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:KKR04652.1}; EC=2.7.7.23 {ECO:0000313|
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Pyrococcus furiosus RepID=I6UMP5_9EURY
glucose-1-phosphate thymidylyltransferase
(db=HMMPfam db_id=PF00483 from=2 to=214 evalue=1.6e-20 interpro_id=IPR005835 interpro_description=Nucleotidyl transferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
gwa2_scaffold_140_26
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

24653..25441
DNA (789bp) protein (263aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6AIL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKQ71791.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
glycosyl transferase family protein
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=229 evalue=1.7e-33)
gwa2_scaffold_140_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(25443..28817)
DNA (3375bp) protein (1125aa)
Major sperm protein (Fragment) n=1 Tax=Ascaris suum RepID=F1L9L7_ASCSU
Uncharacterized protein {ECO:0000313|EMBL:KKR04650.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=234 to=255 evalue=NA)
gwa2_scaffold_140_28
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(28829..32638)
DNA (3810bp) protein (1270aa)
Putative uncharacterized protein n=1 Tax=Aquifex aeolicus VF5 RepID=O67811_AQUAE
Putative uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=352 to=365)
gwa2_scaffold_140_29
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(32778..33398)
DNA (621bp) protein (207aa)
Tax=zPERA2_38_36
gwa2_scaffold_140_30
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(33415..33921)
DNA (507bp) protein (169aa)
Tax=zPERA2_38_36
Displaying items 1-30 of 104 in total

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