ggKbase home page

gwa2_scaffold_510

Alias: zPERA2_38_36_7

Search features with annotation key words

Displaying items 1-30 of 81 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_510_1
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(62..469)
DNA (408bp) protein (136aa)
transmembrane_regions Tax=zPERA2_38_36
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=21)
gwa2_scaffold_510_2
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(564..1355)
DNA (792bp) protein (264aa)
Metallophosphoesterase n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UQQ8_ROSS1
Metallophosphoesterase Tax=zPERA2_38_36
metallophosphoesterase
(db=HMMPfam db_id=PF00149 from=6 to=216 evalue=3.3e-05 interpro_id=IPR004843 interpro_description=Metallophosphoesterase domain GO=Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_510_3
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

1470..2054
DNA (585bp) protein (195aa)
DnaQ exonuclease/DinG helicase family protein, ATP-dependent DNA helicase DinG {ECO:0000313|EMBL:KKR05860.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KKR05860.1};; TaxID=1619062 species="Bacteria; Peregrinibact
DnaQ exonuclease/DinG helicase family protein n=1 Tax=Caldilinea aerophila DSM 14535 = NBRC 104270 RepID=I0I321_CALAS
DnaQ exonuclease/DinG helicase family protein
dnaq: exonuclease, DNA polymerase III, epsil (db=HMMTigr db_id=TIGR00573 from=8 to=192 evalue=1.7e-08 interpro_id=IPR006054 interpro_description=DNA polymerase III, epsilon subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260))
gwa2_scaffold_510_4
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

2029..3642
DNA (1614bp) protein (538aa)
DNA polymerase III, epsilon subunit n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B6Z3_HERA2
DNA polymerase III, epsilon subunit Tax=zPERA2_38_36
DNA polymerase III subunit epsilon
gwa2_scaffold_510_5
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(3647..5623)
DNA (1977bp) protein (659aa)
UvrABC system protein B n=1 Tax=Clostridium clariflavum DSM 19732 RepID=G8LVM0_CLOCD rbh
UvrABC system protein B {ECO:0000313|EMBL:KKQ71281.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
Excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=262 to=283 evalue=NA)
gwa2_scaffold_510_6
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

5849..6646
DNA (798bp) protein (266aa)
Inositol-phosphate phosphatase, myo-inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:KKR05863.1}; EC=3.1.3.25 {ECO:0000313|EMBL:KKR05863.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" so
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E151_DICTD
IMP_1 (db=PatternScan db_id=PS00629 from=86 to=99 evalue=0.0 interpro_id=IPR020583 interpro_description=Inositol monophosphatase, metal-binding site)
gwa2_scaffold_510_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

6658..7071
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=2 Tax=Vibrio furnissii RepID=C9PHE1_VIBFU
Uncharacterized protein {ECO:0000313|EMBL:KKR05864.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
(db=HMMPfam db_id=PF09391 from=4 to=136 evalue=1.1e-33 interpro_id=IPR018988 interpro_description=Protein of unknown function DUF2000)
gwa2_scaffold_510_8
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

7062..7757
DNA (696bp) protein (232aa)
methionine aminopeptidase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3778F
Methionine aminopeptidase {ECO:0000313|EMBL:KKR05865.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
(db=HMMPfam db_id=PF00557 from=5 to=222 evalue=1.4e-16 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=1 to=231 evalue=1.9e-19 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
gwa2_scaffold_510_9
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(7861..8349)
DNA (489bp) protein (163aa)
NYN domain, limkain-b1-type Tax=zPERA2_38_36
(db=HMMPfam db_id=PF01936 from=3 to=122 evalue=7.7e-13 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwa2_scaffold_510_10
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

8431..8889
DNA (459bp) protein (153aa)
Tagatose-bisphosphate aldolase, tagatose 1,6-diphosphate aldolase {ECO:0000313|EMBL:KKR05867.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KKR05867.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" sourc
tagatose-bisphosphate aldolase (EC:4.1.2.40)
Tagatose 1,6-diphosphate aldolase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q028X3_SOLUE
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=10 to=128 evalue=2.7e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
gwa2_scaffold_510_11
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(9143..10066)
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05868.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=284 to=295)
gwa2_scaffold_510_12
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(10203..11492)
DNA (1290bp) protein (430aa)
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=2 Tax=Desulfotomaculum RepID=F6BA10_DESCC rbh
Alanine dehydrogenase {ECO:0000313|EMBL:KKQ71288.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
seg (db=Seg db_id=seg from=172 to=198)
gwa2_scaffold_510_13
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(11646..13892)
DNA (2247bp) protein (749aa)
Tax=zPERA2_38_36
gwa2_scaffold_510_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(13990..14646)
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase, ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKR05871.1}; EC=5.1.3.1 {ECO:0000313|EMBL:KKR05871.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="P
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=3 Tax=Bacillus methanolicus RepID=I3DTN4_BACMT
RIBUL_P_3_EPIMER_1 (db=PatternScan db_id=PS01085 from=37 to=51 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
gwa2_scaffold_510_15
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(14634..15089)
DNA (456bp) protein (152aa)
Ribose 5-phosphate isomerase B, ribose 5-phosphate isomerase B {ECO:0000313|EMBL:KKR05872.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KKR05872.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="P
ribose-5-phosphate isomerase B n=1 Tax=Lactobacillus vini DSM 20605 RepID=UPI00029B3457
ribose 5-phosphate isomerase
rpiB_lacA_lacB: sugar-phosphate isomer (db=HMMTigr db_id=TIGR00689 from=7 to=151 evalue=1.3e-71 interpro_id=IPR003500 interpro_description=Ribose/galactose isomerase GO=Biological Process: carbohydrate metabolic process (GO:0005975))
gwa2_scaffold_510_16
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(15178..16122)
DNA (945bp) protein (315aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WRI7_BACT2 rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KKQ71292.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
no description (db=Gene3D db_id=G3DSA:3.40.50.2020 from=5 to=173 evalue=1.0e-59)
gwa2_scaffold_510_17
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(16140..17090)
DNA (951bp) protein (317aa)
Transketolase central region, transketolase {ECO:0000313|EMBL:KKR05874.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KKR05874.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria ba
tktB; Transketolase subunit B (EC:2.2.1.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGC5_9FIRM rbh
seg (db=Seg db_id=seg from=209 to=219)
gwa2_scaffold_510_18
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(17132..17995)
DNA (864bp) protein (288aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase, beta subunit n=2 Tax=Thermoanaerobacter siderophilus SR4 RepID=I8QZ57_9THEO
Transketolase, beta subunit {ECO:0000313|EMBL:KKQ71294.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
(db=HMMPfam db_id=PF00456 from=8 to=268 evalue=1.2e-68 interpro_id=IPR005474 interpro_description=Transketolase, N-terminal)
gwa2_scaffold_510_19
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(18054..18773)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05876.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=9 to=22)
gwa2_scaffold_510_20
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(18810..18974)
DNA (165bp) protein (55aa)
Tax=zPERA2_38_36
gwa2_scaffold_510_21
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(19080..19568)
DNA (489bp) protein (163aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Desulfarculus baarsii DSM 2075 RepID=E1QJQ5_DESB2
Nucleoside diphosphate kinase Tax=zPERA2_38_36
NDP_KINASES (db=PatternScan db_id=PS00469 from=120 to=128 evalue=0.0 interpro_id=IPR023005 interpro_description=Nucleoside diphosphate kinase, active site)
gwa2_scaffold_510_22
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(19644..20684)
DNA (1041bp) protein (347aa)
Ribonuclease E, ribonuclease E {ECO:0000313|EMBL:KKR05879.1}; EC=3.1.26.12 {ECO:0000313|EMBL:KKR05879.1};; EC=3.1.4.- {ECO:0000313|EMBL:KKR05879.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria
ribonuclease E (EC:3.1.4.-)
RNAse E n=2 Tax=Burkholderia RepID=A4JCN8_BURVG
seg (db=Seg db_id=seg from=18 to=43)
gwa2_scaffold_510_23
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(20721..24296)
DNA (3576bp) protein (1192aa)
Uncharacterized protein n=1 Tax=Magnetococcus marinus MC-1 RepID=A0L7N9_MAGSM
Uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
coiled-coil (db=Coil db_id=coil from=534 to=555 evalue=NA)
gwa2_scaffold_510_24
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

24498..24755
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05881.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
(db=HMMPfam db_id=PF04014 from=10 to=47 evalue=7.5e-05 interpro_id=IPR007159 interpro_description=Transcription regulator AbrB/SpoV, predicted)
gwa2_scaffold_510_25
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

24748..24987
DNA (240bp) protein (80aa)
Tax=zPERA2_38_36
gwa2_scaffold_510_26
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(24984..26243)
DNA (1260bp) protein (420aa)
protease 3 precursor (EC:3.4.24.55)
Processing protease n=2 Tax=Brevibacillus laterosporus RepID=H0U8W4_BRELA rbh
Processing protease {ECO:0000313|EMBL:KKQ71302.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
seg (db=Seg db_id=seg from=218 to=236)
gwa2_scaffold_510_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

26566..28818
DNA (2253bp) protein (751aa)
Stage V sporulation protein D n=11 Tax=Clostridium perfringens RepID=B1RNJ8_CLOPF
Stage V sporulation protein D, stage V sporulation protein D (Sporulation-specific penicillin-binding protein) {ECO:0000313|EMBL:KKR05884.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" sour
Penicillin-binding protein, transpeptidase protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
gwa2_scaffold_510_28
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

28934..29578
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MJ83_RHOM4
Uncharacterized protein {ECO:0000313|EMBL:KKR05885.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
gwa2_scaffold_510_29
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

29682..30794
DNA (1113bp) protein (371aa)
hypothetical protein; K14510 serine/threonine-protein kinase CTR1 [EC:2.7.11.1]
Uncharacterized protein n=2 Tax=Panicoideae RepID=K3ZQY3_SETIT
Uncharacterized protein Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=215 to=236 evalue=NA)
gwa2_scaffold_510_30
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(31017..31193)
DNA (177bp) protein (59aa)
seg Tax=PER_GWF2_38_29
seg (db=Seg db_id=seg from=34 to=45)
Displaying items 1-30 of 81 in total

View Taxonomy