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gwa2_scaffold_1032

Alias: zPERA2_38_36_9

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_1032_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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137..856
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05003.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=194 to=211)
gwa2_scaffold_1032_2
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

884..1324
DNA (441bp) protein (147aa)
cAMP-binding protein-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase n=2 Tax=unclassified Gammaproteobacteria RepID=A0Z7L1_9GAMM
cAMP-binding protein {ECO:0000313|EMBL:KKR05004.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
cAMP-binding protein
CNMP_BINDING_1 (db=PatternScan db_id=PS00888 from=44 to=60 evalue=0.0 interpro_id=IPR018488 interpro_description=Cyclic nucleotide-binding, conserved site)
gwa2_scaffold_1032_3
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

1355..1930
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YEI2_DICT6
Uncharacterized protein {ECO:0000313|EMBL:KKR05005.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=30 to=43)
gwa2_scaffold_1032_4
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

2069..2368
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05006.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=10 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=93)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=22 evalue=5.0)
gwa2_scaffold_1032_5
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(2374..3378)
DNA (1005bp) protein (335aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=76 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwa2_scaffold_1032_6
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(3477..5123)
DNA (1647bp) protein (549aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=223 to=236)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=516 to=546 evalue=3.6e-05)
gwa2_scaffold_1032_7
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


5236..5499
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S3L1_THEOJ
30S ribosomal protein S15, small subunit ribosomal protein S15 {ECO:0000313|EMBL:KKR05009.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_1
30S ribosomal protein S15
30S RIBOSOMAL PROTEIN S15 (db=HMMPanther db_id=PTHR23321:SF10 from=2 to=86 evalue=1.7e-40 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_1032_8
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists


5657..7765
DNA (2109bp) protein (703aa)
Polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKR05010.1}; EC=2.7.7.8 {ECO:0000313|EMBL:KKR05010.1};; TaxID=1619062 species="Bacteria; Peregrin
Polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Halothermothrix orenii H 168 RepID=PNP_HALOH rbh
polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=9 to=700 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402))
gwa2_scaffold_1032_9
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

7835..9454
DNA (1620bp) protein (540aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=227 to=244)
gwa2_scaffold_1032_10
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(9451..9984)
DNA (534bp) protein (178aa)
dCTP deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Halanaerobium praevalens DSM 2228 RepID=E3DPK5_HALPG
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:KKQ70641.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
no description (db=Gene3D db_id=G3DSA:2.70.40.10 from=1 to=174 evalue=3.9e-53)
gwa2_scaffold_1032_11
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

10049..10465
DNA (417bp) protein (139aa)
Ferritin Dps family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6UH61_9PROT
Bacterioferritin {ECO:0000313|EMBL:KKR05013.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
ferritin Dps family protein
(db=HMMPfam db_id=PF00210 from=7 to=135 evalue=3.0e-21 interpro_id=IPR008331 interpro_description=Ferritin/DPS protein domain GO=Biological Process: cellular iron ion homeostasis (GO:0006879), Molecular Function: ferric iron binding (GO:0008199))
gwa2_scaffold_1032_12
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

10548..11543
DNA (996bp) protein (332aa)
coiled-coil Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
gwa2_scaffold_1032_13
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

11630..13465
DNA (1836bp) protein (612aa)
Multidrug resistance ABC transporter ATP binding protein n=10 Tax=Legionellaceae RepID=G8UTL8_LEGPN rbh
Uncharacterized protein {ECO:0000313|EMBL:KKR05015.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
gwa2_scaffold_1032_14
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(13458..14567)
DNA (1110bp) protein (370aa)
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAR2_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:KKR05016.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=3 to=16)
gwa2_scaffold_1032_15
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

14813..15034
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05017.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
gwa2_scaffold_1032_16
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

15465..15986
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium cellulovorans 743B RepID=D9SRF7_CLOC7
N-acetyltransferase GCN5 {ECO:0000313|EMBL:KKR05018.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
N-acetyltransferase GCN5
seg (db=Seg db_id=seg from=92 to=102)
gwa2_scaffold_1032_17
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

16114..17067
DNA (954bp) protein (318aa)
RhuM n=5 Tax=Coxiella burnetii RepID=A9KCJ8_COXBN rbh
Death-on-curing family protein {ECO:0000313|EMBL:KKR05019.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
rhuM; RhuM
coiled-coil (db=Coil db_id=coil from=181 to=209 evalue=NA)
gwa2_scaffold_1032_18
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

17079..17576
DNA (498bp) protein (166aa)
Regulatory protein n=1 Tax=Enterococcus hirae ATCC 9790 RepID=I6TCP8_ENTHA
Regulatory protein Tax=zPERA2_38_36
regulatory protein
no description (db=Gene3D db_id=G3DSA:3.90.960.10 from=9 to=160 evalue=1.9e-22 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
gwa2_scaffold_1032_19
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

17652..18677
DNA (1026bp) protein (342aa)
coiled-coil Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=58 to=79 evalue=NA)
gwa2_scaffold_1032_20
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

18684..19553
DNA (870bp) protein (290aa)
Tax=zPERA2_38_36
gwa2_scaffold_1032_21
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

19573..21204
DNA (1632bp) protein (544aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=222 to=235)
gwa2_scaffold_1032_22
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

21324..22325
DNA (1002bp) protein (334aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8ADL7_THEID
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:KKR05024.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
RNA polymerase sigma factor, sigma-70 family
seg (db=Seg db_id=seg from=213 to=225)
gwa2_scaffold_1032_23
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

22378..23241
DNA (864bp) protein (288aa)
TIGR00159 family protein n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YGT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKR05025.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=193 to=204)
gwa2_scaffold_1032_24
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

23238..24173
DNA (936bp) protein (312aa)
YbbR family protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF45_9FIRM
YbbR family protein Tax=zPERA2_38_36
hypothetical protein
seg (db=Seg db_id=seg from=17 to=28)
gwa2_scaffold_1032_25
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

24175..25272
DNA (1098bp) protein (366aa)
GTP-dependent translational factor YchF, putative n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A316_PELCD rbh
GTP-dependent nucleic acid-binding protein EngD {ECO:0000313|EMBL:KKR05027.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
ychF; GTP-binding protein YchF
TIGR00092: GTP-binding protein YchF (db=HMMTigr db_id=TIGR00092 from=1 to=365 evalue=1.2e-169 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
gwa2_scaffold_1032_26
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(25269..27608)
DNA (2340bp) protein (780aa)
GTP pyrophosphokinase, GTP pyrophosphokinase {ECO:0000313|EMBL:KKR05028.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KKR05028.1};; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria b
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9Z8_CARHZ rbh
seg (db=Seg db_id=seg from=243 to=255)
gwa2_scaffold_1032_27
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

27681..28769
DNA (1089bp) protein (363aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase, tRNA-specific 2-thiouridylase {ECO:0000313|EMBL:KKR05029.1}; EC=2.8.1.- {ECO:0000313|EMBL:KKR05029.1};; TaxID=1619062 species="Bacteria;
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDM4_9FIRM rbh
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
seg (db=Seg db_id=seg from=286 to=299)
gwa2_scaffold_1032_28
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

28993..29994
DNA (1002bp) protein (334aa)
sortase n=1 Tax=Clostridium arbusti SL206 RepID=UPI000288805C
Sortase {ECO:0000313|EMBL:KKR05030.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
sortase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=124)
gwa2_scaffold_1032_29
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(29991..30500)
DNA (510bp) protein (170aa)
Tetratricopeptide TPR_3 n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BIB3_CHLPD
Uncharacterized protein {ECO:0000313|EMBL:KKR05031.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
coiled-coil (db=Coil db_id=coil from=93 to=125 evalue=NA)
gwa2_scaffold_1032_30
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

30542..32569
DNA (2028bp) protein (676aa)
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Thermodesulfatator indicus DSM 15286 RepID=F8A8Z2_THEID rbh
DNA ligase Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
Displaying items 1-30 of 39 in total

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