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GWA2_OD1-rel_38_13_curated_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWA2_OD1-rel_38_13_curated_scaffold_9_1
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

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comp(2..205)
DNA (204bp) protein (68aa)
Putative uncharacterized protein id=5095177 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
GWA2_OD1-rel_38_13_curated_scaffold_9_2
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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comp(213..800)
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=5095178 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
GWA2_OD1-rel_38_13_curated_scaffold_9_3

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comp(899..1657)
DNA (759bp) protein (253aa)
Integrase catalytic subunit n=1 Tax=uncultured bacterium RepID=K1XEN5_9BACT
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:KKQ56539.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
transposase
GWA2_OD1-rel_38_13_curated_scaffold_9_trna_4
unknown

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comp(2180..2252)
DNA (73bp)
transferRNA Asn
GWA2_OD1-rel_38_13_curated_scaffold_9_4

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comp(2288..2983)
DNA (696bp) protein (232aa)
Potassium uptake system protein TrkA {ECO:0000313|EMBL:KKQ56540.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Similar to potassium uptake system protein TrkA id=3772499 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
TrkA domain-containing protein
GWA2_OD1-rel_38_13_curated_scaffold_9_5

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comp(3096..4448)
DNA (1353bp) protein (451aa)
V-type sodium ATP synthase subunit J n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B77E63 rbh
YubG {ECO:0000313|EMBL:KKQ56541.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
ktrB; potassium transporter ATPase KtrB rbh
GWA2_OD1-rel_38_13_curated_scaffold_9_6

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comp(4616..5911)
DNA (1296bp) protein (432aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKQ56542.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
RNA polymerase sigma factor id=2823713 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
RpoD subfamily RNA polymerase sigma-70 subunit rbh
GWA2_OD1-rel_38_13_curated_scaffold_9_7

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comp(5968..7443)
DNA (1476bp) protein (492aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56543.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_8

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comp(7454..9259)
DNA (1806bp) protein (602aa)
Primase protein {ECO:0000313|EMBL:KKQ56544.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
DNA primase id=2823715 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
DNA primase rbh
GWA2_OD1-rel_38_13_curated_scaffold_9_9

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comp(9292..10536)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1WYA8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ56545.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_10

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comp(10555..11118)
DNA (564bp) protein (188aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56546.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Putative uncharacterized protein id=2648833 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
GWA2_OD1-rel_38_13_curated_scaffold_9_11

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comp(11142..12599)
DNA (1458bp) protein (486aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4) rbh
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363B069 rbh
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKQ56547.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_12

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comp(12647..12937)
DNA (291bp) protein (97aa)
gatC; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=2896 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
gatC; glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:KKQ56548.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_13
unknown

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comp(12956..13069)
DNA (114bp) protein (38aa)

This feature has no annotations

GWA2_OD1-rel_38_13_curated_scaffold_9_14

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comp(13123..14412)
DNA (1290bp) protein (430aa)
tjr:TherJR_0850 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=2936 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
DNA ligase (EC:6.5.1.2) rbh
Ligase protein {ECO:0000313|EMBL:KKQ56549.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_15

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comp(14369..15217)
DNA (849bp) protein (283aa)
DNA ligase id=2648816 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Ligase protein {ECO:0000313|EMBL:KKP98785.1}; TaxID=1618919 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
Lig; NAD-dependent DNA ligase
GWA2_OD1-rel_38_13_curated_scaffold_9_16

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comp(15214..15627)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56551.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_17

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comp(15638..16189)
DNA (552bp) protein (184aa)
Tfp pilus assembly protein PilW {ECO:0000313|EMBL:KKQ56552.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Putative uncharacterized protein id=4731757 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
GWA2_OD1-rel_38_13_curated_scaffold_9_18

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comp(16201..16719)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003747F1D
Uncharacterized protein {ECO:0000313|EMBL:KKQ56553.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_19

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comp(16689..17228)
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56554.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
id=4731759 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
GWA2_OD1-rel_38_13_curated_scaffold_9_20

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comp(17237..17650)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56555.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_21

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comp(17746..18585)
DNA (840bp) protein (280aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Aspartate peptidase {ECO:0000313|EMBL:KKQ56556.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Type 4 prepilin-like proteins leader peptide-processing enzyme id=3594541 bin=GWA1_ZB2_49_26 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
GWA2_OD1-rel_38_13_curated_scaffold_9_22

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comp(18703..19209)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
Pilin {ECO:0000313|EMBL:KKQ56557.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
fimbrial protein pilin
GWA2_OD1-rel_38_13_curated_scaffold_9_23

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comp(19622..20830)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A05CE rbh
Type IV pilin {ECO:0000313|EMBL:KKQ56558.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
type II secretion system protein F
GWA2_OD1-rel_38_13_curated_scaffold_9_24

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comp(20952..22019)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373007F rbh
Twitching motility protein {ECO:0000313|EMBL:KKQ56559.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
twitching motility protein PilT
GWA2_OD1-rel_38_13_curated_scaffold_9_25

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comp(22119..22496)
DNA (378bp) protein (126aa)
Two component transcriptional regulator, winged helix family n=1 Tax=uncultured bacterium RepID=K1ZC77_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:KKQ56560.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Two component transcriptional regulator, winged helix
GWA2_OD1-rel_38_13_curated_scaffold_9_26

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comp(22533..23009)
DNA (477bp) protein (159aa)
General secretion pathway protein G {ECO:0000313|EMBL:KKQ56561.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Type II secretion system protein G
Type II secretion system protein G id=5226094 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
GWA2_OD1-rel_38_13_curated_scaffold_9_27

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comp(23012..24757)
DNA (1746bp) protein (582aa)
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:KKQ56562.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Type II secretion system protein E id=2607645 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation rbh
xpsE; Type II secretory pathway ATPase PulE/Tfp
GWA2_OD1-rel_38_13_curated_scaffold_9_28

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comp(24770..25063)
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56563.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
GWA2_OD1-rel_38_13_curated_scaffold_9_29

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comp(25186..25719)
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ56564.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Displaying items 1-30 of 47 in total

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