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gwa2_scaffold_300

Alias: GW2011_AR4_5

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Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_300_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(204..620)
DNA (417bp) protein (139aa)
Tax=AR4
gwa2_scaffold_300_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(611..1141)
DNA (531bp) protein (177aa)
Uncharacterized protein n=3 Tax=Legionella RepID=Q5WS52_LEGPA
hypothetical protein Tax=AR4
hypothetical protein
seg (db=Seg db_id=seg from=39 to=55)
gwa2_scaffold_300_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1201..1482)
DNA (282bp) protein (94aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=10 to=22)
gwa2_scaffold_300_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1479..14762)
DNA (13284bp) protein (4428aa)
Serine/threonine protein kinase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HEB8_9EURY
cell surface protein Tax=AR4
hypothetical protein
seg (db=Seg db_id=seg from=10 to=26)
gwa2_scaffold_300_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

15150..15935
DNA (786bp) protein (262aa)
seg Tax=AR4
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=22 to=34)
gwa2_scaffold_300_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

16006..16659
DNA (654bp) protein (218aa)
Tax=AR4
gwa2_scaffold_300_7

Not on your lists

16809..17648
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome PF39_9ZZZZ">RepID=D9PF39_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHO47022.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
seg (db=Seg db_id=seg from=270 to=279)
gwa2_scaffold_300_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

18009..19202
DNA (1194bp) protein (398aa)
UPI0000F51788 related cluster n=1 Tax=unknown RepID=UPI0000F51788
putative ATPase (AAA+ superfamily); K07133 Tax=AR4
hypothetical protein
coiled-coil (db=Coil db_id=coil from=349 to=370 evalue=NA)
gwa2_scaffold_300_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19215..19703
DNA (489bp) protein (163aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=59 to=77)
gwa2_scaffold_300_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19761..20300
DNA (540bp) protein (180aa)
Prophage antirepressor n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6Z0_GEOUR
prophage antirepressor Tax=AR4
prophage antirepressor
(db=HMMPfam db_id=PF02498 from=20 to=105 evalue=2.1e-09 interpro_id=IPR003497 interpro_description=BRO N-terminal domain)
gwa2_scaffold_300_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

20362..20607
DNA (246bp) protein (82aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8J3_GEOUR
hypothetical protein Tax=AR4
hypothetical protein
gwa2_scaffold_300_12
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20671..21285)
DNA (615bp) protein (205aa)
Nucleotidyl transferase domain Tax=AR4
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=111 evalue=4.3e-10)
(db=HMMPfam db_id=PF01909 from=23 to=56 evalue=5.7e-08 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
gwa2_scaffold_300_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21278..21676)
DNA (399bp) protein (133aa)
coiled-coil Tax=AR4
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
gwa2_scaffold_300_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

21871..22404
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA
hypothetical protein Tax=AR4
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.30.460.10 from=72 to=132 evalue=0.00042)
gwa2_scaffold_300_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

22401..22808
DNA (408bp) protein (136aa)
coiled-coil Tax=AR4
coiled-coil (db=Coil db_id=coil from=22 to=43 evalue=NA)
gwa2_scaffold_300_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23074..23838
DNA (765bp) protein (255aa)
anaerobic ribonucleoside-triphosphate reductase activating protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=AR4
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGN0_METVM
anaerobic ribonucleoside-triphosphate reductase activating protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=14 to=237 evalue=4.9e-19)
gwa2_scaffold_300_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23786..25072)
DNA (1287bp) protein (429aa)
Transposase IS4 family protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHQ2_9EURY
Transposase, IS4 family protein/SWIM domain fusion Tax=AR4
transposase family protein
(db=HMMPfam db_id=PF01609 from=206 to=370 evalue=8.8e-13 interpro_id=IPR002559 interpro_description=Transposase, IS4-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
gwa2_scaffold_300_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

25290..25580
DNA (291bp) protein (97aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=2 to=18)
gwa2_scaffold_300_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

25570..25806
DNA (237bp) protein (79aa)
Tax=AR4
gwa2_scaffold_300_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

25837..26787
DNA (951bp) protein (317aa)
putative adenine-specific DNA-methyltransferase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=AR4
BstYI methyltransferase n=1 Tax=Geobacillus stearothermophilus RepID=Q84AF3_GEOSE
DNA methylase N-4/N-6 domain protein
N4_MTASE (db=PatternScan db_id=PS00093 from=43 to=48 evalue=0.0 interpro_id=IPR017985 interpro_description=DNA methylase, N-4 cytosine-specific, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: site-specific DNA-methyltransferase (cytosine-N4-specific) activity (GO:0015667), Biological Process: N-4 methylation of cytosine (GO:0090124))
gwa2_scaffold_300_21
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26761..27534)
DNA (774bp) protein (258aa)
Restriction endonuclease n=1 Tax=Burkholderia phage DC1 RepID=I6NRM4_9CAUD
restriction endonuclease BglII Tax=AR4
restriction endonuclease BglII
(db=HMMPfam db_id=PF09195 from=67 to=255 evalue=1.8e-36 interpro_id=IPR015278 interpro_description=Restriction endonuclease, type II, BglII)
gwa2_scaffold_300_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

27723..28466
DNA (744bp) protein (248aa)
PROKAR_LIPOPROTEIN Tax=AR4
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
gwa2_scaffold_300_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

28463..29002
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1P3_DEHLB
hypothetical protein Tax=AR4
hypothetical protein
seg (db=Seg db_id=seg from=73 to=85)
gwa2_scaffold_300_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(28989..29216)
DNA (228bp) protein (76aa)
Protein of unknown function DUF167 Tax=AR4
UNCHARACTERIZED (db=HMMPanther db_id=PTHR13420 from=7 to=75 evalue=0.00044)
(db=HMMPfam db_id=PF02594 from=5 to=74 evalue=2.5e-18 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
no description (db=Gene3D db_id=G3DSA:3.30.1200.10 from=3 to=75 evalue=4.2e-12 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
gwa2_scaffold_300_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

29306..29677
DNA (372bp) protein (124aa)
Sensor histidine kinase n=1 Tax=Methylophaga lonarensis MPL RepID=M7NYX8_9GAMM
multi-sensor hybrid histidine kinase Tax=AR4
multi-sensor hybrid histidine kinase
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=123 evalue=1.9e-22)
gwa2_scaffold_300_26
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

29758..30201
DNA (444bp) protein (148aa)
Tax=AR4
gwa2_scaffold_300_27
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30192..30515)
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit n=2 Tax=Pyrobaculum RepID=A4WLS3_PYRAR
transcription termination factor Tfs; K03057 transcription elongation factor Tax=AR4
transcription factor S, archaeal
ZF_TFIIS_1 (db=PatternScan db_id=PS00466 from=68 to=103 evalue=0.0 interpro_id=IPR001222 interpro_description=Zinc finger, TFIIS-type GO=Molecular Function: nucleic acid binding (GO:0003676), Biological Process: transcription, DNA-dependent (GO:0006351), Molecular Function: zinc ion binding (GO:0008270))
gwa2_scaffold_300_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30526..31146)
DNA (621bp) protein (207aa)
Peptidase S26B, eukaryotic signal peptidase Tax=AR4
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
PROTEASE FAMILY S26 MICROSOMAL SIGNAL PEPTIDASE SUBUNIT SPC18,21/SEC11(YEAST) (db=HMMPanther db_id=PTHR10806 from=103 to=198 evalue=1.8e-11 interpro_id=IPR001733 interpro_description=Peptidase S26B, eukaryotic signal peptidase GO=Biological Process: signal peptide processing (GO:0006465), Molecular Function: peptidase activity (GO:0008233), Cellular Component: membrane (GO:0016020))
gwa2_scaffold_300_29
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

31199..31639
DNA (441bp) protein (147aa)
NMD3-related protein (Nonsense mediated mRNA decay) n=3 Tax=Methanobrevibacter smithii RepID=A5UKI9_METS3
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 Tax=AR4
NMD3-related protein (nonsense mediated mRNA decay)
(db=HMMPfam db_id=PF04981 from=2 to=92 evalue=7.8e-10 interpro_id=IPR007064 interpro_description=NMD3)
gwa2_scaffold_300_30
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(31611..32768)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAF9_METCZ
hypothetical protein; K09150 hypothetical protein Tax=AR4
hypothetical protein
coiled-coil (db=Coil db_id=coil from=190 to=225 evalue=NA)
Displaying items 1-30 of 63 in total

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