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gwa2_scaffold_470

Alias: GW2011_AR4_7

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Displaying items 1-30 of 63 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_470_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(99..1175)
DNA (1077bp) protein (359aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=AR4
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=3 Tax=Desulfurococcus RepID=E8R8J0_DESM0
PHOSPHOENOLPYRUVATE-UTILIZING (db=HMMPanther db_id=PTHR22931:SF3 from=240 to=350 evalue=2.8e-25)
gwa2_scaffold_470_2
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1184..1915)
DNA (732bp) protein (244aa)
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=AR4
UDP diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB05_9FIRM
no description (db=Gene3D db_id=G3DSA:3.40.1180.10 from=18 to=238 evalue=1.0e-30 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
gwa2_scaffold_470_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

1968..2864
DNA (897bp) protein (299aa)
peptidase A24A domain-containing protein; K07991 archaeal preflagellin peptidase FlaK [EC:3.4.23.52] Tax=AR4
Peptidase A24A prepilin type IV n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUF4_9EURY
Peptidase A24A prepilin type IV
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
gwa2_scaffold_470_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2848..3312)
DNA (465bp) protein (155aa)
UPI00026C7A71 related cluster n=1 Tax=unknown RepID=UPI00026C7A71
UPI00026C7A71 related cluster Tax=AR4
Histidine triad (HIT) superfamily protein
coiled-coil (db=Coil db_id=coil from=107 to=128 evalue=NA)
gwa2_scaffold_470_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3309..4292)
DNA (984bp) protein (328aa)
Histidine triad (HIT) protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPG3_ROSS1
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR4
histidine triad (HIT) protein
seg (db=Seg db_id=seg from=201 to=267)
gwa2_scaffold_470_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

4353..5132
DNA (780bp) protein (260aa)
Predicted RNA-binding protein, eukaryotic snRNP-like protein n=3 Tax=Methanobrevibacter smithii RepID=A5ULA5_METS3
RNA-binding protein snRNP-like protein Tax=AR4
RNA-binding protein snRNP-like protein
coiled-coil (db=Coil db_id=coil from=19 to=57 evalue=NA)
gwa2_scaffold_470_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5086..6240)
DNA (1155bp) protein (385aa)
Tax=AR4
gwa2_scaffold_470_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6329..6979
DNA (651bp) protein (217aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Metallosphaera cuprina (strain Ar-4) RepID=F4G3H9_METCR
carbohydrate kinase, YjeF related protein Tax=AR4
carbohydrate kinase, YjeF related protein
(db=HMMPfam db_id=PF03853 from=18 to=185 evalue=1.5e-35 interpro_id=IPR004443 interpro_description=YjeF-related protein, N-terminal)
gwa2_scaffold_470_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6976..7752
DNA (777bp) protein (259aa)
Predicted sugar kinase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYC5_METTM
sugar kinase Tax=AR4
carbohydrate kinase
(db=HMMPfam db_id=PF01256 from=21 to=253 evalue=3.1e-44 interpro_id=IPR000631 interpro_description=Uncharacterised domain, carbohydrate kinase-related)
gwa2_scaffold_470_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

7749..9464
DNA (1716bp) protein (572aa)
Transporter, CPA2 family n=4 Tax=Methanococcus maripaludis RepID=A4FZ11_METM5
sodium/hydrogen exchanger Tax=AR4
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwa2_scaffold_470_11
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

9464..9727
DNA (264bp) protein (88aa)
RNA-binding, CRM domain Tax=AR4
seg (db=Seg db_id=seg from=29 to=49)
no description (db=Gene3D db_id=G3DSA:3.30.110.60 from=4 to=86 evalue=1.3e-09 interpro_id=IPR001890 interpro_description=RNA-binding, CRM domain GO=Molecular Function: RNA binding (GO:0003723))
(db=HMMPfam db_id=PF01985 from=7 to=84 evalue=1.1e-17 interpro_id=IPR001890 interpro_description=RNA-binding, CRM domain GO=Molecular Function: RNA binding (GO:0003723))
gwa2_scaffold_470_12
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

9984..11423
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEJ2_9EURY
Putative uncharacterized protein Tax=AR4
hypothetical protein
coiled-coil (db=Coil db_id=coil from=388 to=409 evalue=NA)
gwa2_scaffold_470_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11417..11920
DNA (504bp) protein (168aa)
coiled-coil Tax=AR4
coiled-coil (db=Coil db_id=coil from=17 to=67 evalue=NA)
seg (db=Seg db_id=seg from=53 to=69)
gwa2_scaffold_470_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

11922..13913
DNA (1992bp) protein (664aa)
Xylose isomerase-like, TIM barrel domain Tax=AR4
no description (db=Gene3D db_id=G3DSA:3.20.20.150 from=494 to=608 evalue=0.00022 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
coiled-coil (db=Coil db_id=coil from=329 to=350 evalue=NA)
seg (db=Seg db_id=seg from=398 to=409)
gwa2_scaffold_470_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13935..14774)
DNA (840bp) protein (280aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=2 to=25)
gwa2_scaffold_470_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14771..14908)
DNA (138bp) protein (46aa)
Tax=AR4
gwa2_scaffold_470_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14996..16003)
DNA (1008bp) protein (336aa)
Glycosyl transferase, family 2 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCH5_GEOUR
glycosyl transferase family protein Tax=AR4
glycosyl transferase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=262)
gwa2_scaffold_470_18
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15991..17088)
DNA (1098bp) protein (366aa)
Radical SAM domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCH6_GEOUR
radical SAM domain-containing protein Tax=AR4
radical SAM domain-containing protein
(db=HMMPfam db_id=PF04055 from=24 to=168 evalue=1.8e-12 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
gwa2_scaffold_470_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17174..18004)
DNA (831bp) protein (277aa)
seg Tax=AR4
seg (db=Seg db_id=seg from=5 to=18)
gwa2_scaffold_470_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(18194..18502)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=10 Tax=Thermococcus RepID=RS10_THEGJ
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 Tax=AR4
rps10p; 30S ribosomal protein S10P
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=27 to=42 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_470_21

Not on your lists

comp(18568..19854)
DNA (1287bp) protein (429aa)
Translation elongation factor 1A (EF-1A/EF-Tu) n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BCI4_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=61 to=76 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
gwa2_scaffold_470_22

Not on your lists

comp(20002..22185)
DNA (2184bp) protein (728aa)
Elongation factor 2 n=25 Tax=Thermococcus RepID=EF2_PYRKO
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Elongation factor 2
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=58 to=73 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
gwa2_scaffold_470_23
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22208..22726)
DNA (519bp) protein (173aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=AR4
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside-diphosphate kinase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QJM6_CATAD
Nucleoside diphosphate kinase, NDK (db=superfamily db_id=SSF54919 from=14 to=172 evalue=1.7e-49 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleoside diphosphate phosphorylation (GO:0006165), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosyn
gwa2_scaffold_470_24
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(22872..23159)
DNA (288bp) protein (96aa)
30S ribosomal protein S28e n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=RS28_KORCO
rps28e; 30S ribosomal protein S28e; K02979 small subunit ribosomal protein S28e Tax=AR4
30S ribosomal protein S28e
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=24 to=94 evalue=1.6e-22 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
gwa2_scaffold_470_25
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(23174..23497)
DNA (324bp) protein (108aa)
50S ribosomal protein L7Ae n=20 Tax=Thermococcaceae RepID=RL7A_PYRAB
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=AR4
50S ribosomal protein L7Ae
no description (db=Gene3D db_id=G3DSA:3.30.1330.30 from=3 to=105 evalue=1.5e-26)
gwa2_scaffold_470_26
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

23866..24198
DNA (333bp) protein (111aa)
Tax=AR4
gwa2_scaffold_470_27

Not on your lists


comp(24270..24869)
DNA (600bp) protein (200aa)
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO46955.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
30S ribosomal protein S7
no description (db=Gene3D db_id=G3DSA:1.10.455.10 from=4 to=199 evalue=1.6e-53 interpro_id=IPR023798 interpro_description=Ribosomal protein S7 domain)
gwa2_scaffold_470_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24866..25303)
DNA (438bp) protein (146aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR4
30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=61 to=68 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwa2_scaffold_470_29
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25386..25805)
DNA (420bp) protein (140aa)
NusA family KH domain protein n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UV47_META3
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=AR4
hypothetical protein
seg (db=Seg db_id=seg from=56 to=67)
gwa2_scaffold_470_30
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25807..26085)
DNA (279bp) protein (93aa)
NEQ179 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MP1_NANEQ
hypothetical protein; K02908 large subunit ribosomal protein L30e Tax=AR4
50S ribosomal protein L30e
seg (db=Seg db_id=seg from=10 to=43)
Displaying items 1-30 of 63 in total

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