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gwa2_scaffold_241

Alias: GW2011_AR5_4

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Displaying items 1-30 of 120 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_241_1
AR5, Aenigmarchaeota, DPANN, Archaea

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144..773
DNA (630bp) protein (210aa)
50S ribosomal protein L1P n=1 Tax=Thermococcus zilligii AN1 RepID=UPI00029A648F
rpl1P; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=AR5
rpl1P; 50S ribosomal protein L1
Ribosomal protein L1 (db=superfamily db_id=SSF56808 from=3 to=207 evalue=2.9e-49 interpro_id=IPR023674 interpro_description=Ribosomal protein L1, superfamily GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
gwa2_scaffold_241_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

773..1606
DNA (834bp) protein (278aa)
Ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
LSU ribosomal protein l10p; K02864 large subunit ribosomal protein L10 Tax=AR5
50S ribosomal protein L10
coiled-coil (db=Coil db_id=coil from=255 to=276 evalue=NA)
gwa2_scaffold_241_3

Not on your lists

1636..1935
DNA (300bp) protein (100aa)
50S ribosomal protein L12 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AI14_PYRYC
50S ribosomal protein L12, large subunit ribosomal protein L12 {ECO:0000313|EMBL:KHO47543.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
rpl12p; 50S ribosomal protein L12
seg (db=Seg db_id=seg from=17 to=30)
gwa2_scaffold_241_4
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

2076..2768
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JJF0_9CLOT
hypothetical protein Tax=AR5
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.50.40.10 from=86 to=228 evalue=0.0004 interpro_id=IPR020825 interpro_description=Phenylalanyl-tRNA synthetase, B3/B4)
gwa2_scaffold_241_5
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

2770..5496
DNA (2727bp) protein (909aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=AR5
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=SYA_UNCMA
seg (db=Seg db_id=seg from=489 to=504)
gwa2_scaffold_241_6
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

5493..5618
DNA (126bp) protein (42aa)
alias=gwa2_scaffold_241_6 Tax=AR5
gwa2_scaffold_241_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(5644..6105)
DNA (462bp) protein (154aa)
seg Tax=AR5
seg (db=Seg db_id=seg from=14 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
gwa2_scaffold_241_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6106..6447)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXQ4_METFV
hypothetical protein; K09008 hypothetical protein Tax=AR5
hypothetical protein
MTH938-like (db=superfamily db_id=SSF64076 from=2 to=111 evalue=2.4e-16 interpro_id=IPR007523 interpro_description=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3)
gwa2_scaffold_241_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6510..7106)
DNA (597bp) protein (199aa)
ADP-ribose pyrophosphatase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNH3_9CLOT
ADP-ribose pyrophosphatase Tax=AR5
hypothetical protein
NUDIX_BOX (db=PatternScan db_id=PS00893 from=76 to=97 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_241_10
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7113..7979)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVL5_9EURY
Putative uncharacterized protein Tax=AR5
INTEIN (db=FPrintScan db_id=PR00379 from=97 to=109 evalue=2.2e-05 interpro_id=IPR006142 interpro_description=Intein GO=Biological Process: intein-mediated protein splicing (GO:0016539))
Homing endonucleases (db=superfamily db_id=SSF55608 from=185 to=284 evalue=4.7e-12)
gwa2_scaffold_241_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(8037..8270)
DNA (234bp) protein (78aa)
alias=gwa2_scaffold_241_11 Tax=AR5
gwa2_scaffold_241_12
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

8348..8770
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QAS6_9EURY
Uncharacterized protein Tax=AR5
seg (db=Seg db_id=seg from=118 to=129)
gwa2_scaffold_241_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9050..9583)
DNA (534bp) protein (178aa)
alias=gwa2_scaffold_241_13 Tax=AR5
gwa2_scaffold_241_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(9589..10107)
DNA (519bp) protein (173aa)
CMP/dCMP deaminase zinc-binding protein; K01493 dCMP deaminase [EC:3.5.4.12] Tax=AR5
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EXE2_SPICH
CMP/dCMP deaminase zinc-binding protein
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=92 to=127 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_241_15
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(10439..10738)
DNA (300bp) protein (100aa)
alias=gwa2_scaffold_241_15 Tax=AR5
gwa2_scaffold_241_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(10912..11208)
DNA (297bp) protein (99aa)
Regulatory protein MarR n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBU8_METMS
regulatory protein MarR Tax=AR5
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=94 evalue=2.3e-07)
gwa2_scaffold_241_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11462..11674
DNA (213bp) protein (71aa)
Archaeal histone B n=4 Tax=Methanobacterium RepID=HFOB_METFO
transcription factor CBF/NF-Y/histone domain-containing protein Tax=AR5
hfoB; archaeal histone B HfoB
seg (db=Seg db_id=seg from=27 to=42)
gwa2_scaffold_241_18
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11710..12693
DNA (984bp) protein (328aa)
Replication factor-A C terminal domain, OB-fold nucleic acid binding domain family protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF63_9EURY
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 Tax=AR5
Nucleic acid binding OB-fold tRNA/helicase-type
seg (db=Seg db_id=seg from=262 to=276)
gwa2_scaffold_241_19
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12734..13762
DNA (1029bp) protein (343aa)
DNA repair and recombination protein RadA n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKL7_THEBM
DNA repair and recombination RadA-like protein; K04483 DNA repair protein RadA Tax=AR5
radA; DNA repair and recombination protein RadA
seg (db=Seg db_id=seg from=4 to=12)
gwa2_scaffold_241_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(13752..14171)
DNA (420bp) protein (140aa)
seg Tax=AR5
seg (db=Seg db_id=seg from=91 to=103)
gwa2_scaffold_241_21
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(14402..14656)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF58_9EURY
hypothetical protein Tax=AR5
hypothetical protein
PRC-barrel domain (db=superfamily db_id=SSF50346 from=1 to=83 evalue=2.4e-07 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
gwa2_scaffold_241_22
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(14787..15971)
DNA (1185bp) protein (395aa)
Type II secretion system protein A n=1 Tax=nanoarchaeote Nst1 RepID=R1E417_9ARCH
Type II secretion system protein A Tax=AR5
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=82 to=119 evalue=0.00062)
no description (db=HMMSmart db_id=SM00382 from=96 to=231 evalue=1.0e-07 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
gwa2_scaffold_241_23
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16889..17470
DNA (582bp) protein (194aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=AR5
2'-5' RNA ligase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYL9_METFV
2'-5' RNA ligase
coiled-coil (db=Coil db_id=coil from=10 to=31 evalue=NA)
gwa2_scaffold_241_24
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17427..17819
DNA (393bp) protein (131aa)
transmembrane_regions Tax=AR5
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
(db=HMMPfam db_id=PF02760 from=36 to=88 evalue=0.00034 interpro_id=IPR004021 interpro_description=HIN-200/IF120x)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=37 to=129 evalue=2.1e-06 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
gwa2_scaffold_241_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

17848..18495
DNA (648bp) protein (216aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I890_METCZ
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis Tax=AR5
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=212 evalue=1.1e-49)
gwa2_scaffold_241_26
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(18496..19809)
DNA (1314bp) protein (438aa)
Phosphomannomutase / Phosphoglucosamine mutase (EC:5.4.2.8 5.4.2.10)
Probable phosphomannomutase/phosphoglucomutase n=1 Tax=uncultured archaeon RepID=D1JA39_9ARCH
hypothetical protein Tax=AR5
seg (db=Seg db_id=seg from=144 to=155)
gwa2_scaffold_241_27
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

19895..22399
DNA (2505bp) protein (835aa)
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] Tax=AR5
Aminopeptidase N n=2 Tax=Cyanothece RepID=B1WZD0_CYAA5
pepN; aminopeptidase N
seg (db=Seg db_id=seg from=180 to=193)
gwa2_scaffold_241_28
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

22438..23478
DNA (1041bp) protein (347aa)
Xaa-Pro dipeptidase (EC:3.4.13.9); K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=AR5
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase n=1 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=Q6L0D6_PICTO
PROLINE_PEPTIDASE (db=PatternScan db_id=PS00491 from=277 to=289 evalue=0.0 interpro_id=IPR001131 interpro_description=Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site)
gwa2_scaffold_241_29
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(23475..23627)
DNA (153bp) protein (51aa)
alias=gwa2_scaffold_241_29 Tax=AR5
gwa2_scaffold_241_30

Not on your lists

comp(23924..25096)
DNA (1173bp) protein (391aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
UPF0095 protein Arcve_0273 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KP00_ARCVS
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.1360.10 from=159 to=271 evalue=0.00011)
Displaying items 1-30 of 120 in total

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