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gwa2_scaffold_250

Alias: GW2011_AR19_1

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Displaying items 1-30 of 194 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_250_1
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

2..1111
DNA (1110bp) protein (370aa)
Putative hyalin n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCZ6_9GAMM
hypothetical protein Tax=AR19
bhp; putative cell wall associated biofilm protein
seg (db=Seg db_id=seg from=121 to=139)
gwa2_scaffold_250_2
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(1147..2061)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSP8_ARCVS
hypothetical protein Tax=AR19
hypothetical protein
(db=HMMPfam db_id=PF01972 from=12 to=276 evalue=2.2e-16 interpro_id=IPR002825 interpro_description=Peptidase S49, serine-peptidase prokaryotes GO=Cellular Component: integral to membrane (GO:0016021))
gwa2_scaffold_250_3
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(2072..2209)
DNA (138bp) protein (46aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=14 to=28)
gwa2_scaffold_250_4
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

2620..3123
DNA (504bp) protein (168aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=2 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwa2_scaffold_250_5
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3228..3476)
DNA (249bp) protein (83aa)
"Winged helix" DNA-binding domain Tax=AR19
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=8 to=81 evalue=5.2e-06)
gwa2_scaffold_250_6
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

3536..4405
DNA (870bp) protein (290aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=7 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
gwa2_scaffold_250_7
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(4507..5187)
DNA (681bp) protein (227aa)
coiled-coil Tax=AR19
coiled-coil (db=Coil db_id=coil from=16 to=37 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
gwa2_scaffold_250_8
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(5207..6628)
DNA (1422bp) protein (474aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=AR19
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39)
Ribulose bisphosphate carboxylase, type III n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGK0_ACIB4
coiled-coil (db=Coil db_id=coil from=217 to=238 evalue=NA)
gwa2_scaffold_250_9
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6660..7994)
DNA (1335bp) protein (445aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=AR19
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Methanobacterium RepID=K2RQM0_METFO
seg (db=Seg db_id=seg from=388 to=407)
gwa2_scaffold_250_10
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8057..8605)
DNA (549bp) protein (183aa)
transmembrane_regions Tax=AR19
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
gwa2_scaffold_250_11
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8607..8885)
DNA (279bp) protein (93aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=32 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwa2_scaffold_250_12

Not on your lists


comp(8943..9662)
DNA (720bp) protein (240aa)
50S ribosomal protein L11 n=7 Tax=Pyrococcus RepID=RL11_PYRAB
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
LSU ribosomal protein L11P
seg (db=Seg db_id=seg from=71 to=86)
gwa2_scaffold_250_13
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


comp(9665..10114)
DNA (450bp) protein (150aa)
LSU ribosomal protein L24A (Rpl24A) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=AR19
LSU ribosomal protein L24A Rpl24A
seg (db=Seg db_id=seg from=118 to=132)
gwa2_scaffold_250_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10197..10490)
DNA (294bp) protein (98aa)
Tax=AR19
gwa2_scaffold_250_15
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

10519..10698
DNA (180bp) protein (60aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=3 to=18)
gwa2_scaffold_250_16

Not on your lists

comp(10727..11593)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39WR3_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:KHO55412.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
seg (db=Seg db_id=seg from=187 to=201)
gwa2_scaffold_250_17
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(11635..11943)
DNA (309bp) protein (103aa)
CutA1 divalent ion tolerance protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE34_ARCPA
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein Tax=AR19
CutA1 divalent ion tolerance protein
GlnB-like (db=superfamily db_id=SSF54913 from=2 to=102 evalue=2.0e-27 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
gwa2_scaffold_250_18

Not on your lists

comp(12162..13277)
DNA (1116bp) protein (372aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Cell division protein FtsZ
seg (db=Seg db_id=seg from=35 to=50)
gwa2_scaffold_250_19
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(13334..14044)
DNA (711bp) protein (237aa)
Nucleotidyl transferase domain Tax=AR19
seg (db=Seg db_id=seg from=48 to=62)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=7 to=94 evalue=3.5e-09)
(db=HMMPfam db_id=PF01909 from=7 to=67 evalue=5.3e-09 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
gwa2_scaffold_250_20
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14035..15012)
DNA (978bp) protein (326aa)
coiled-coil Tax=AR19
coiled-coil (db=Coil db_id=coil from=93 to=114 evalue=NA)
gwa2_scaffold_250_21
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

15132..15839
DNA (708bp) protein (236aa)
Domain of unknown function DUF218 Tax=AR19
seg (db=Seg db_id=seg from=5 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
(db=HMMPfam db_id=PF02698 from=71 to=173 evalue=6.6e-11 interpro_id=IPR003848 interpro_description=Domain of unknown function DUF218)
gwa2_scaffold_250_22
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(15820..16536)
DNA (717bp) protein (239aa)
FKBP type peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] Tax=AR19
FKBP-type peptidyl-prolyl cis-trans isomerase n=1 Tax=sediment metagenome RepID=D9PEV4_9ZZZZ
Peptidyl-prolyl cis-trans isomerase
seg (db=Seg db_id=seg from=153 to=164)
gwa2_scaffold_250_23
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists


16588..16980
DNA (393bp) protein (131aa)
Translation initiation factor 5A n=1 Tax=sediment metagenome RepID=D9PEV2_9ZZZZ
translation initiation factor eIF-5A; K03263 translation initiation factor 5A Tax=AR19
Translation initiation factor 5A
Translation initiation factor eIF-5A (db=HMMPIR db_id=PIRSF003025 from=1 to=129 evalue=1.1e-25 interpro_id=IPR001884 interpro_description=Translation elongation factor IF5A GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: translation elongation factor activity (GO:0003746), Biological Process: translational frameshifting (GO:0006452), Biological Process: peptidyl-lysine modification to hypusine (GO:0008612), Molecular Function: ribosome binding (GO:0043022), Biological Process: positive
gwa2_scaffold_250_24
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

17358..18770
DNA (1413bp) protein (471aa)
Peptidase M50 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DMX5_STAMF
peptidase M50 Tax=AR19
Peptidase M50
seg (db=Seg db_id=seg from=8 to=22)
gwa2_scaffold_250_25
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(19250..19561)
DNA (312bp) protein (104aa)
Tax=AR19
gwa2_scaffold_250_26

Not on your lists

comp(19563..19913)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55422.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
gwa2_scaffold_250_27

Not on your lists


20047..20703
DNA (657bp) protein (219aa)
50S ribosomal protein L1P n=1 Tax=Thermococcus zilligii AN1 RepID=UPI00029A648F
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO55423.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
50S ribosomal protein L1
seg (db=Seg db_id=seg from=197 to=206)
gwa2_scaffold_250_28
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

20700..20834
DNA (135bp) protein (45aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=23 to=32)
gwa2_scaffold_250_29
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

20831..21814
DNA (984bp) protein (328aa)
Acidic ribosomal protein P0 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6UTT6_9EURY
rplP0; acidic ribosomal protein P0; K02864 large subunit ribosomal protein L10 Tax=AR19
rplP0; acidic ribosomal protein P0
(db=HMMPfam db_id=PF00466 from=24 to=123 evalue=1.4e-12 interpro_id=IPR001790 interpro_description=Ribosomal protein L10/acidic P0 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
gwa2_scaffold_250_30
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

21815..21916
DNA (102bp) protein (34aa)
seg Tax=AR19
seg (db=Seg db_id=seg from=14 to=33)
Displaying items 1-30 of 194 in total

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