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gwa2_scaffold_111

Alias: GW2011_AR20_4

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Displaying items 1-30 of 164 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_111_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1..156)
DNA (156bp) protein (52aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(244..585)
DNA (342bp) protein (114aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(582..959)
DNA (378bp) protein (126aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=52 to=73 evalue=NA)
Tax=AR20
gwa2_scaffold_111_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(967..1707)
DNA (741bp) protein (247aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_5
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

1863..1973
DNA (111bp) protein (37aa)
hypothetical protein
seg (db=Seg db_id=seg from=8 to=36)
Tax=AR20
gwa2_scaffold_111_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

2034..2396
DNA (363bp) protein (121aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_7
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2625..2837)
DNA (213bp) protein (71aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_8
unknown

Not on your lists

2910..4556
DNA (1647bp) protein (549aa)
Glutamate--tRNA ligase n=2 Tax=Methanotorris RepID=F6BEG2_METIK Tax=AR20
Glutamate--tRNA ligase n=2 Tax=Methanotorris RepID=F6BEG2_METIK
Glutamate-tRNA ligase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=102 to=113 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwa2_scaffold_111_9
unknown

Not on your lists

4588..6366
DNA (1779bp) protein (593aa)
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IQX9_RAHAC
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly
seg (db=Seg db_id=seg from=25 to=37)
gwa2_scaffold_111_10
unknown

Not on your lists


6521..6868
DNA (348bp) protein (116aa)
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE Tax=AR20
50S ribosomal protein L7Ae n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RL7A_AERPE
50S ribosomal protein L7Ae
L30e-like (db=superfamily db_id=SSF55315 from=3 to=115 evalue=1.2e-30)
gwa2_scaffold_111_11

Not on your lists


6868..7173
DNA (306bp) protein (102aa)
30S ribosomal protein S28e n=1 Tax=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) RepID=RS28_AERPE
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
30S ribosomal protein S28e
seg (db=Seg db_id=seg from=4 to=20)
gwa2_scaffold_111_12

Not on your lists

7175..7354
DNA (180bp) protein (60aa)
50S ribosomal protein L24e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGY7_ARCPA
50S ribosomal protein L24e {ECO:0000313|EMBL:AJF63021.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
50S ribosomal protein L24e
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
gwa2_scaffold_111_13
unknown

Not on your lists

comp(7393..7623)
DNA (231bp) protein (77aa)
Conserved Archaeal protein n=3 Tax=Sulfolobus acidocaldarius RepID=Q4JA74_SULAC Tax=AR20
Conserved Archaeal protein
no description (db=Gene3D db_id=G3DSA:3.30.70.920 from=3 to=75 evalue=0.00025 interpro_id=IPR019887 interpro_description=Transcription regulator AsnC-type, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
Dimeric alpha+beta barrel (db=superfamily db_id=SSF54909 from=1 to=74 evalue=1.9e-06 interpro_id=IPR011008 interpro_description=Dimeric alpha-beta barrel)
gwa2_scaffold_111_14
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7693..7824)
DNA (132bp) protein (44aa)
hypothetical protein
seg (db=Seg db_id=seg from=17 to=34)
Tax=AR20
gwa2_scaffold_111_15
unknown

Not on your lists

7924..8895
DNA (972bp) protein (324aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL
SpoVT/AbrB protein
(db=HMMPfam db_id=PF01895 from=138 to=226 evalue=2.2e-06 interpro_id=IPR008170 interpro_description=PhoU)
gwa2_scaffold_111_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

8892..10253
DNA (1362bp) protein (454aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_17
unknown

Not on your lists

10307..12022
DNA (1716bp) protein (572aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV Tax=AR20
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV
putative translation initiation factor IF-2
coiled-coil (db=Coil db_id=coil from=314 to=342 evalue=NA)
gwa2_scaffold_111_18
unknown

Not on your lists


12023..12472
DNA (450bp) protein (150aa)
30S ribosomal protein S6e n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZQ0_METCG Tax=AR20
30S ribosomal protein S6e n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZQ0_METCG
30S ribosomal protein S6e
seg (db=Seg db_id=seg from=125 to=144)
gwa2_scaffold_111_19
unknown

Not on your lists


12505..13734
DNA (1230bp) protein (410aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM Tax=AR20
Translation initiation factor 2 subunit gamma n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQJ1_METIM
Translation initiation factor 2 subunit gamma
seg (db=Seg db_id=seg from=133 to=146)
gwa2_scaffold_111_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13766..14812
DNA (1047bp) protein (349aa)
hypothetical protein
seg (db=Seg db_id=seg from=124 to=133)
coiled-coil (db=Coil db_id=coil from=300 to=321 evalue=NA)
Tax=AR20
gwa2_scaffold_111_21
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

14809..14943
DNA (135bp) protein (45aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_22
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

15007..15597
DNA (591bp) protein (197aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_111_23
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

15655..17220
DNA (1566bp) protein (522aa)
hypothetical protein
seg (db=Seg db_id=seg from=58 to=70)
Tax=AR20
gwa2_scaffold_111_24
unknown

Not on your lists

17213..17812
DNA (600bp) protein (200aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH Tax=AR20
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH
Conserved hypothetical membrane protein, peptidase family M50
seg (db=Seg db_id=seg from=172 to=187)
gwa2_scaffold_111_25
unknown

Not on your lists


comp(17817..20228)
DNA (2412bp) protein (804aa)
DNA gyrase subunit A n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8P8_CARHZ Tax=AR20
DNA gyrase subunit A n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A8P8_CARHZ
DNA gyrase subunit A
seg (db=Seg db_id=seg from=437 to=449)
gwa2_scaffold_111_26
unknown

Not on your lists

comp(20230..20670)
DNA (441bp) protein (147aa)
hypothetical protein COdytL_13024 n=1 Tax=Candidatus Odyssella thessalonicensis L13 RepID=UPI000225A9FA Tax=AR20
hypothetical protein COdytL_13024 n=1 Tax=Candidatus Odyssella thessalonicensis L13 RepID=UPI000225A9FA
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=3 to=102 evalue=1.7e-05 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
gwa2_scaffold_111_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20672..20872)
DNA (201bp) protein (67aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=28)
coiled-coil (db=Coil db_id=coil from=6 to=27 evalue=NA)
Tax=AR20
gwa2_scaffold_111_28

Not on your lists


comp(20874..22766)
DNA (1893bp) protein (631aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1579378 species="Archaea.;"
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ
DNA gyrase subunit B
seg (db=Seg db_id=seg from=206 to=213)
gwa2_scaffold_111_29
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22944..23999)
DNA (1056bp) protein (352aa)
hypothetical protein
seg (db=Seg db_id=seg from=8 to=18)
(db=HMMPfam db_id=PF01464 from=191 to=313 evalue=2.3e-06 interpro_id=IPR008258 interpro_description=Lytic transglycosylase-like, catalytic)
Lysozyme-like (db=superfamily db_id=SSF53955 from=184 to=315 evalue=4.2e-11 interpro_id=IPR023346 interpro_description=Lysozyme-like domain)
gwa2_scaffold_111_30
unknown

Not on your lists

comp(24035..26206)
DNA (2172bp) protein (724aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA Tax=AR20
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA
Elongation factor 2
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=59 to=74 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
Displaying items 1-30 of 164 in total

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