ggKbase home page

gwa2_scaffold_226

Alias: GW2011_AR20_2

Search features with annotation key words

Displaying items 1-30 of 226 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_226_1
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..6662)
DNA (6660bp) protein (2220aa)
Parallel beta-helix repeat protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNG1_ARCVS
hypothetical protein
Fibronectin type III (db=superfamily db_id=SSF49265 from=980 to=1067 evalue=0.00028 interpro_id=IPR003961 interpro_description=Fibronectin, type III GO=Molecular Function: protein binding (GO:0005515))
no description (db=Gene3D db_id=G3DSA:2.60.120.200 from=669 to=810 evalue=0.00062 interpro_id=IPR013320 interpro_description=Concanavalin A-like lectin/glucanase, subgroup)
localization in the cell wall (psortB) Cindy Castelle (10/29/13)
gwa2_scaffold_226_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6640..8856)
DNA (2217bp) protein (739aa)
hypothetical protein AlS89_10470, partial n=1 Tax=Alteromonas sp. S89 RepID=UPI0002558DFC
hypothetical protein
SUBTILASE_ASP (db=PatternScan db_id=PS00136 from=424 to=434 evalue=0.0 interpro_id=IPR023827 interpro_description=Peptidase S8, subtilisin, Asp-active site)
seg (db=Seg db_id=seg from=82 to=104)
gwa2_scaffold_226_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9129..9464
DNA (336bp) protein (112aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_226_4
unknown

Not on your lists

comp(9474..9878)
DNA (405bp) protein (135aa)
Hypothetical M protein n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QSH5_PERMH Tax=AR20
putative M protein
gwa2_scaffold_226_5
unknown

Not on your lists

comp(9934..10653)
DNA (720bp) protein (240aa)
Uncharacterized protein n=3 Tax=Solanum RepID=K4BVL0_SOLLC Tax=AR20
Uncharacterized protein n=3 Tax=Solanum RepID=K4BVL0_SOLLC
hypothetical protein
seg (db=Seg db_id=seg from=40 to=53)
gwa2_scaffold_226_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10684..10833)
DNA (150bp) protein (50aa)
hypothetical protein
seg (db=Seg db_id=seg from=37 to=49)
Tax=AR20
gwa2_scaffold_226_7
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10884..11582)
DNA (699bp) protein (233aa)
hypothetical protein
seg (db=Seg db_id=seg from=153 to=163)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=4 to=225 evalue=4.8e-06)
(db=HMMPfam db_id=PF07091 from=76 to=229 evalue=5.4e-24)
gwa2_scaffold_226_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11557..11790)
DNA (234bp) protein (78aa)
hypothetical protein
seg (db=Seg db_id=seg from=12 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=28)
Tax=AR20
gwa2_scaffold_226_9
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

12142..12402
DNA (261bp) protein (87aa)
hypothetical protein
seg (db=Seg db_id=seg from=29 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
Tax=AR20
gwa2_scaffold_226_10
unknown

Not on your lists

12525..14348
DNA (1824bp) protein (608aa)
ATP dependent helicase n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC82_9EURY Tax=AR20
ATP dependent helicase n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AC82_9EURY
ATP dependent helicase
seg (db=Seg db_id=seg from=225 to=237)
gwa2_scaffold_226_11
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14469..15143)
DNA (675bp) protein (225aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.10.28.10 from=98 to=214 evalue=0.00036)
seg (db=Seg db_id=seg from=144 to=158)
INTEIN (db=FPrintScan db_id=PR00379 from=8 to=20 evalue=2.4e-08 interpro_id=IPR006142 interpro_description=Intein GO=Biological Process: intein-mediated protein splicing (GO:0016539))
gwa2_scaffold_226_12
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15525..16196)
DNA (672bp) protein (224aa)
hypothetical protein
seg (db=Seg db_id=seg from=68 to=83)
Homing endonucleases (db=superfamily db_id=SSF55608 from=96 to=198 evalue=1.4e-08)
INTEIN_ENDONUCLEASE (db=ProfileScan db_id=PS50819 from=10 to=153 evalue=9.266 interpro_id=IPR004042 interpro_description=Intein DOD homing endonuclease GO=Molecular Function: endonuclease activity (GO:0004519))
gwa2_scaffold_226_13
unknown

Not on your lists

comp(16285..17286)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFG8_9EURY Tax=AR20
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFG8_9EURY
hypothetical protein
seg (db=Seg db_id=seg from=25 to=42)
gwa2_scaffold_226_14
unknown

Not on your lists

comp(17338..17841)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY Tax=AR20
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSM3_9EURY
hypothetical protein
(db=HMMPfam db_id=PF01936 from=10 to=159 evalue=1.3e-36 interpro_id=IPR021139 interpro_description=NYN domain, limkain-b1-type)
gwa2_scaffold_226_15
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

17971..18726
DNA (756bp) protein (252aa)
hypothetical protein
seg (db=Seg db_id=seg from=36 to=51)
Tax=AR20
gwa2_scaffold_226_16
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

18707..19048
DNA (342bp) protein (114aa)
hypothetical protein
Tax=AR20
gwa2_scaffold_226_17
unknown

Not on your lists

comp(19041..20765)
DNA (1725bp) protein (575aa)
DNA polymerase X family / putative histidinol phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF Tax=AR20
DNA polymerase X family / putative histidinol phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF
hypothetical protein
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=94 to=160 evalue=0.00078 interpro_id=IPR010994 interpro_description=RuvA domain 2-like)
gwa2_scaffold_226_18
unknown

Not on your lists

20839..21492
DNA (654bp) protein (218aa)
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY Tax=AR20
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY
Ribonuclease
seg (db=Seg db_id=seg from=48 to=70)
gwa2_scaffold_226_19

Not on your lists

21533..21760
DNA (228bp) protein (76aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62754.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
gwa2_scaffold_226_20

Not on your lists

21753..22061
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62755.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Cell growth inhibitor/plasmid maintenance toxic component (db=superfamily db_id=SSF50118 from=1 to=101 evalue=3.2e-08 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
gwa2_scaffold_226_21
unknown

Not on your lists

22110..24791
DNA (2682bp) protein (894aa)
Chromosome partition protein Smc n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI9_9FIRM Tax=AR20
Chromosome partition protein Smc n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFI9_9FIRM
Chromosome partition protein Smc
seg (db=Seg db_id=seg from=156 to=173)
gwa2_scaffold_226_22
unknown

Not on your lists

comp(24792..27182)
DNA (2391bp) protein (797aa)
Putative uncharacterized protein n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBB2_9EURY Tax=AR20
hypothetical protein
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
gwa2_scaffold_226_23
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(27276..28592)
DNA (1317bp) protein (439aa)
hypothetical protein
seg (db=Seg db_id=seg from=291 to=307)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
(db=HMMPfam db_id=PF11614 from=307 to=377 evalue=5.6e-06)
gwa2_scaffold_226_24
unknown

Not on your lists

comp(28651..30570)
DNA (1920bp) protein (640aa)
RHS repeat-associated core domain protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EM26_9CYAN Tax=AR20
RHS repeat-associated core domain protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EM26_9CYAN
RHS repeat-associated core protein
seg (db=Seg db_id=seg from=6 to=16)
gwa2_scaffold_226_25
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(30572..32083)
DNA (1512bp) protein (504aa)
hypothetical protein
seg (db=Seg db_id=seg from=291 to=308)
Tax=AR20
gwa2_scaffold_226_26
unknown

Not on your lists

comp(32315..32944)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYM8_PIRSD Tax=AR20
Putative uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYM8_PIRSD
hypothetical protein
Nudix (db=superfamily db_id=SSF55811 from=47 to=206 evalue=2.7e-07 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
gwa2_scaffold_226_27
unknown

Not on your lists

comp(32979..33572)
DNA (594bp) protein (198aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV4_METFV Tax=AR20
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXV4_METFV
tRNA (pseudouridine(54)-N(1))-methyltransferase
seg (db=Seg db_id=seg from=90 to=103)
gwa2_scaffold_226_28
unknown

Not on your lists

comp(33604..34020)
DNA (417bp) protein (139aa)
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT Tax=AR20
Heat shock protein Hsp20 n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DG46_HYDTT
Heat shock protein Hsp20
seg (db=Seg db_id=seg from=69 to=84)
gwa2_scaffold_226_29
unknown

Not on your lists

34120..35199
DNA (1080bp) protein (360aa)
Dihydroorotate dehydrogenase 2 n=1 Tax=Vibrio nigripulchritudo ATCC 27043 RepID=F9TGL8_9VIBR Tax=AR20
Dihydroorotate dehydrogenase 2 n=1 Tax=Vibrio nigripulchritudo ATCC 27043 RepID=F9TGL8_9VIBR
Dihydroorotate dehydrogenase 2
seg (db=Seg db_id=seg from=28 to=46)
gwa2_scaffold_226_30
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(35209..35751)
DNA (543bp) protein (181aa)
hypothetical protein
Tax=AR20
Displaying items 1-30 of 226 in total

View Taxonomy