ggKbase home page

gwa2_scaffold_5920

Alias: GW2011_AR21_5

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_5920_1

Not on your lists

1..588
DNA (588bp) protein (196aa)
Thymidine phosphorylase {ECO:0000313|EMBL:KHO55800.1}; EC=2.4.2.4 {ECO:0000313|EMBL:KHO55800.1};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
thymidine phosphorylase (EC:2.4.2.4)
AMP phosphorylase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BHE6_9EURY
gwa2_scaffold_5920_2

Not on your lists

comp(683..1090)
DNA (408bp) protein (136aa)
Maf-like protein n=1 Tax=sediment metagenome RepID=D9PK74_9ZZZZ
Maf-like protein {ECO:0000313|EMBL:KHO55801.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
gwa2_scaffold_5920_3

Not on your lists

1162..1500
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55802.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gwa2_scaffold_5920_4

Not on your lists

1548..1898
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55803.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gwa2_scaffold_5920_5

Not on your lists


comp(1900..2694)
DNA (795bp) protein (265aa)
16S rRNA (Adenine1518-N6/adenine1519-N6)-dimethyltransferase {ECO:0000313|EMBL:KHO55804.1}; EC=2.1.1.182 {ECO:0000313|EMBL:KHO55804.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.
ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase (EC:2.1.1.182)
Probable ribosomal RNA small subunit methyltransferase A n=2 Tax=Methanocaldococcus RepID=RSMA_METJA
gwa2_scaffold_5920_6

Not on your lists

2704..3492
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55805.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gwa2_scaffold_5920_7

Not on your lists

comp(3495..4067)
DNA (573bp) protein (191aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27380_METTH
Uncharacterized protein {ECO:0000313|EMBL:KHO55806.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
gwa2_scaffold_5920_8

Not on your lists

comp(4100..4432)
DNA (333bp) protein (111aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:KHO55807.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO55807.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH
hypothetical protein
gwa2_scaffold_5920_9

Not on your lists


comp(4429..4740)
DNA (312bp) protein (104aa)
50S ribosomal protein L21e n=1 Tax=Methanoregula boonei (strain 6A8) RepID=RL21_METB6
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L21e
gwa2_scaffold_5920_10

Not on your lists

5008..5748
DNA (741bp) protein (247aa)
TATA-box binding protein (TBP), component of TFIID and TFIIIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8H6_9ARCH
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
transcription initiation factor TFIID TATA-box-binding protein
gwa2_scaffold_5920_11

Not on your lists

6174..8117
DNA (1944bp) protein (648aa)
Putative uncharacterized protein PH1271 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58981_PYRHO
Uncharacterized protein {ECO:0000313|EMBL:KHO55810.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Oligosaccharyl transferase, STT3 subunit
gwa2_scaffold_5920_12

Not on your lists

8121..9122
DNA (1002bp) protein (334aa)
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase {ECO:0000313|EMBL:KHO55811.1}; EC=2.7.8.15 {ECO:0000313|EMBL:KHO55811.1};; TaxID=1579379 species="Archaea.;" source="ar
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (EC:2.7.8.15)
Glycosyl transferase, family 4 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7Q8_METTP
gwa2_scaffold_5920_13

Not on your lists

9124..9582
DNA (459bp) protein (153aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=1 Tax=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) RepID=Q03KK7_STRTD
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:KHO55812.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
cpsF; polysaccharide biosynthesis protein CpsF
gwa2_scaffold_5920_14

Not on your lists

9579..10085
DNA (507bp) protein (169aa)
Glycosyltransferase 28 domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M571_9CLOT
Beta-1,4-galactosyltransferase {ECO:0000313|EMBL:KHO55813.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
EpsH protein
gwa2_scaffold_5920_15

Not on your lists

10082..10972
DNA (891bp) protein (297aa)
Glycosyl transferase, family 2 n=1 Tax=sediment metagenome RepID=D9PIV4_9ZZZZ
Glycosyl transferase, family 2 {ECO:0000313|EMBL:KHO55814.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
family 2 glycosyl transferase
gwa2_scaffold_5920_16

Not on your lists

11044..12504
DNA (1461bp) protein (487aa)
Magnesium-protoporphyrin IX monomethyl ester (Oxidative) cyclase {ECO:0000313|EMBL:KHO55815.1}; EC=1.14.13.81 {ECO:0000313|EMBL:KHO55815.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PUP7_9BACT
bchE; Fe-S oxidoreductase
gwa2_scaffold_5920_17

Not on your lists

12509..13510
DNA (1002bp) protein (334aa)
Glycosyltransferases, probably involved in cell wall biogenesis n=1 Tax=uncultured verrucomicrobium HF0500_08N17 RepID=E7C4Y2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHO55816.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
gwa2_scaffold_5920_18

Not on your lists

13507..14589
DNA (1083bp) protein (361aa)
Heptosyltransferase III {ECO:0000313|EMBL:KHO55817.1}; EC=2.4.-.- {ECO:0000313|EMBL:KHO55817.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Lipopolysaccharide heptosyltransferase II n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRG7_9FIRM
lipopolysaccharide heptosyltransferase II
gwa2_scaffold_5920_19

Not on your lists

14586..15689
DNA (1104bp) protein (368aa)
Glycosyl transferase group 1 n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUW8_CHLT3
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO55818.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
group 1 glycosyl transferase
gwa2_scaffold_5920_20

Not on your lists

15686..16837
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 n=2 Tax=Haloterrigena RepID=D2RX57_HALTV
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO55819.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
group 1 glycosyl transferase
gwa2_scaffold_5920_21

Not on your lists

16834..17898
DNA (1065bp) protein (355aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55820.1}; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
Displaying 21 items

View Taxonomy