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gwa2_scaffold_9325

Alias: GW2011_AR21_9

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_9325_1

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1..360
DNA (360bp) protein (120aa)
Ribosomal protein L4/L1 family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFI8_ACIB4
Large subunit ribosomal protein L4e {ECO:0000313|EMBL:KHO55753.1}; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L4P
gwa2_scaffold_9325_2

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372..878
DNA (507bp) protein (169aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO
Large subunit ribosomal protein L23 {ECO:0000313|EMBL:KHO55754.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L23
gwa2_scaffold_9325_3

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880..1602
DNA (723bp) protein (241aa)
50S ribosomal protein L2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC1_METFV
Large subunit ribosomal protein L2 {ECO:0000313|EMBL:KHO55755.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L2
gwa2_scaffold_9325_4

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1618..2019
DNA (402bp) protein (134aa)
30S ribosomal protein S19 n=1 Tax=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) RepID=RS19_SULTO
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S19
gwa2_scaffold_9325_5

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2024..2500
DNA (477bp) protein (159aa)
50S ribosomal protein L22P n=2 Tax=Methanotorris RepID=F6BD96_METIK
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L22P, large subunit ribosomal protein L22
gwa2_scaffold_9325_6

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2511..3521
DNA (1011bp) protein (337aa)
30S ribosomal protein S3 n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2RCD2_METFO
Small subunit ribosomal protein S3 {ECO:0000313|EMBL:KHO55758.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S3
gwa2_scaffold_9325_7

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3518..3769
DNA (252bp) protein (84aa)
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gwa2_scaffold_9325_8

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3769..4077
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC6_METFV
Protein translation factor SUI1 homolog {ECO:0000256|PIRNR:PIRNR037511}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
translation initiation factor 1
gwa2_scaffold_9325_9

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4064..4366
DNA (303bp) protein (101aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
ribonuclease P protein subunit POP4 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMR9_METH6
gwa2_scaffold_9325_10

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4371..5000
DNA (630bp) protein (210aa)
30S ribosomal protein S17P n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZNL8_THELI
Small subunit ribosomal protein S17 {ECO:0000313|EMBL:KHO55762.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S17
gwa2_scaffold_9325_11

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4997..5395
DNA (399bp) protein (133aa)
50S ribosomal protein L14P n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSU1_ARCVS
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L14, large subunit ribosomal protein L14
gwa2_scaffold_9325_12

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5406..5762
DNA (357bp) protein (119aa)
50S ribosomal protein L24P n=2 Tax=Methanobacterium RepID=K2R090_METFO
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L24
gwa2_scaffold_9325_13

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5767..6489
DNA (723bp) protein (241aa)
30S ribosomal protein S4e n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXI9_METHD
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S4e
gwa2_scaffold_9325_14

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6449..7012
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD2_METFV
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L5
gwa2_scaffold_9325_15

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7009..7158
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55767.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gwa2_scaffold_9325_16

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7170..7562
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS8_METKA
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
30S ribosomal protein S8, small subunit ribosomal protein S8
gwa2_scaffold_9325_17

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7574..8092
DNA (519bp) protein (173aa)
50S ribosomal protein L6 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE50_ARCPA
Large subunit ribosomal protein L6 {ECO:0000313|EMBL:KHO55769.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L6
gwa2_scaffold_9325_18

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8097..8837
DNA (741bp) protein (247aa)
Putative 50S ribosomal protein L32E n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1X1_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KHO55770.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L32e
gwa2_scaffold_9325_19

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8857..9294
DNA (438bp) protein (146aa)
50S ribosomal protein L19e n=6 Tax=Pyrococcus RepID=RL19E_PYRAB
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
50S ribosomal protein L19e, large subunit ribosomal protein L19e
gwa2_scaffold_9325_20

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9295..9885
DNA (591bp) protein (197aa)
50S ribosomal protein L18P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZD8_METFV
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18
gwa2_scaffold_9325_21

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9899..10630
DNA (732bp) protein (244aa)
30S ribosomal protein S5 n=6 Tax=Methanocaldococcus RepID=RS5_METJA
Small subunit ribosomal protein S5 {ECO:0000313|EMBL:KHO55773.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
30S ribosomal protein S5, small subunit ribosomal protein S5
gwa2_scaffold_9325_22

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10636..11097
DNA (462bp) protein (154aa)
50S ribosomal protein L30P n=2 Tax=Methanotorris RepID=F6BD79_METIK
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rpl30p; 50S ribosomal protein L30
gwa2_scaffold_9325_23

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11100..11474
DNA (375bp) protein (125aa)
50S ribosomal protein L15P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE1_METFV
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L15, large subunit ribosomal protein L15
Displaying 23 items

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