ggKbase home page

GWB1_OD1_40_5_GWB1_scaffold_11119

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_OD1_40_5_GWB1_scaffold_11119_1
unknown

Not on your lists

comp(2..259)
DNA (258bp) protein (86aa)

This feature has no annotations

GWB1_OD1_40_5_GWB1_scaffold_11119_2
unknown

Not on your lists

comp(851..1198)
DNA (348bp) protein (116aa)

This feature has no annotations

GWB1_OD1_40_5_GWB1_scaffold_11119_3

Not on your lists

1385..1885
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36535.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GWB1_OD1_40_5_GWB1_scaffold_11119_4

Not on your lists

1890..2846
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36536.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GWB1_OD1_40_5_GWB1_scaffold_11119_5

Not on your lists

2953..3387
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36537.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
seg id=5803192 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GWB1_OD1_40_5_GWB1_scaffold_11119_6
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

3425..4063
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR52406.1}; TaxID=1618946 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_40_20.;"
hypothetical protein id=5803194 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
GWB1_OD1_40_5_GWB1_scaffold_11119_7

Not on your lists

4107..4451
DNA (345bp) protein (115aa)
S23 ribosomal protein {ECO:0000313|EMBL:KKS36539.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
S23 ribosomal protein id=3506682 bin=GWC1_OD1_38_17 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
S23 ribosomal protein
GWB1_OD1_40_5_GWB1_scaffold_11119_8

Not on your lists

4485..6302
DNA (1818bp) protein (606aa)
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKR19459.1}; TaxID=1618954 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_39_37.;"
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Type IV secretory pathway VirB4 components-like protein
GWB1_OD1_40_5_GWB1_scaffold_11119_9

Not on your lists

6324..6956
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36541.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GWB1_OD1_40_5_GWB1_scaffold_11119_10

Not on your lists

6978..8027
DNA (1050bp) protein (350aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36542.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
seg id=5803196 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GWB1_OD1_40_5_GWB1_scaffold_11119_11

Not on your lists

8032..8922
DNA (891bp) protein (297aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36543.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GWB1_OD1_40_5_GWB1_scaffold_11119_12

Not on your lists

8924..10150
DNA (1227bp) protein (409aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36544.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
seg id=5803198 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GWB1_OD1_40_5_GWB1_scaffold_11119_13

Not on your lists

comp(10157..10822)
DNA (666bp) protein (222aa)
60 kDa inner membrane insertion protein {ECO:0000313|EMBL:KKS36545.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
60 kDa inner membrane insertion protein; K03217 preprotein translocase subunit YidC id=5803200 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
60 kDa inner membrane insertion protein
GWB1_OD1_40_5_GWB1_scaffold_11119_14
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


comp(11209..11439)
DNA (231bp) protein (77aa)
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=5803202 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L34
GWB1_OD1_40_5_GWB1_scaffold_11119_15

Not on your lists

11567..12904
DNA (1338bp) protein (446aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKS36547.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein id=5803203 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosomal replication initiator protein DnaA
GWB1_OD1_40_5_GWB1_scaffold_11119_16

Not on your lists

13128..14228
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=5803204 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Polymerase III subunit beta protein {ECO:0000313|EMBL:KKS36548.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
DNA polymerase III, beta subunit
GWB1_OD1_40_5_GWB1_scaffold_11119_17

Not on your lists

14364..14618
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS36549.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
GWB1_OD1_40_5_GWB1_scaffold_11119_18
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(14623..16779)
DNA (2157bp) protein (719aa)
Penicillin-binding protein, 1A family Tax=GWE1_OD1_40_20
putative penicillin-binding protein id=5803206 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
1A family penicillin-binding protein
GWB1_OD1_40_5_GWB1_scaffold_11119_19
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

16820..17074
DNA (255bp) protein (85aa)
Tyrosyl-tRNA synthetase Tax=GWE1_OD1_40_20
Tyrosyl-tRNA synthetase (Fragment) id=1956649 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
Displaying 19 items

View Taxonomy