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GWB1_OD1_49_6_GWB1_scaffold_3683

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_OD1_49_6_GWB1_scaffold_3683_1
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(3..398)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=GWB1_OD1_49_6_curated
Uncharacterized protein id=5095399 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
GWB1_OD1_49_6_GWB1_scaffold_3683_2
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(402..908)
DNA (507bp) protein (169aa)
RNA polymerase sigma factor SigZ; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWB1_OD1_49_6_curated
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RNA polymerase subunit sigma-24
GWB1_OD1_49_6_GWB1_scaffold_3683_3
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

1014..1991
DNA (978bp) protein (326aa)
hypothetical protein Tax=GWB1_OD1_49_6_curated
UPF0052 protein CA_C0512 id=4120776 bin=GWC2_Chlamydiae_50_10 species=Simkania negevensis genus=Simkania taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_3683_4
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

1995..2735
DNA (741bp) protein (247aa)
Bifunctional gcaD protein (TMS protein); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=GWB1_OD1_49_6_curated
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B334D4
Bifunctional gcaD protein (TMS protein)
GWB1_OD1_49_6_GWB1_scaffold_3683_5
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

2766..3578
DNA (813bp) protein (271aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3683_trna_1
unknown

Not on your lists

4075..4145
DNA (71bp)
transferRNA
GWB1_OD1_49_6_GWB1_scaffold_3683_trna_2
unknown

Not on your lists

4734..4820
DNA (87bp)
transferRNA
GWB1_OD1_49_6_GWB1_scaffold_3683_6
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

4965..5291
DNA (327bp) protein (109aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3683_7
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

5419..5718
DNA (300bp) protein (100aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3683_8
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

5762..6514
DNA (753bp) protein (251aa)
surface antigen
TolA protein Tax=GWB1_OD1_49_6_curated
TolA protein id=5095360 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
GWB1_OD1_49_6_GWB1_scaffold_3683_9
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

6720..7769
DNA (1050bp) protein (350aa)
trypsin-like serine protease with C-terminal PDZ domain Tax=GWB1_OD1_49_6_curated
Protease Do id=3736380 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
protease Do
GWB1_OD1_49_6_GWB1_scaffold_3683_10

Not on your lists

7809..8159
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A9U7_9BACT
23S ribosomal protein {ECO:0000313|EMBL:KKW17123.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
S23 ribosomal protein
GWB1_OD1_49_6_GWB1_scaffold_3683_11
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(8219..9139)
DNA (921bp) protein (307aa)
Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3683_12
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists


comp(9261..11756)
DNA (2496bp) protein (832aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=GWB1_OD1_49_6_curated
leucyl-tRNA synthetase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B71E4A
leucyl-tRNA synthetase
GWB1_OD1_49_6_GWB1_scaffold_3683_13
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(12466..13320)
DNA (855bp) protein (285aa)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=GWB1_OD1_49_6_curated
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] id=5227233 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hydrolase, TatD family
GWB1_OD1_49_6_GWB1_scaffold_3683_14

Not on your lists


comp(13396..14859)
DNA (1464bp) protein (488aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803291 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Methionine-tRNA ligase {ECO:0000313|EMBL:KKW17127.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
methionyl-tRNA synthetase
GWB1_OD1_49_6_GWB1_scaffold_3683_15
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(14993..16030)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XTB5_9BACT
hypothetical protein Tax=GWB1_OD1_49_6_curated
hypothetical protein
GWB1_OD1_49_6_GWB1_scaffold_3683_16
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(16085..17362)
DNA (1278bp) protein (426aa)
processing protease Tax=GWB1_OD1_49_6_curated
tro:trd_1505 processing protease id=134072 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
processing protease
GWB1_OD1_49_6_GWB1_scaffold_3683_17
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(17416..18939)
DNA (1524bp) protein (508aa)
peptidase M23 Tax=GWB1_OD1_49_6_curated
peptidase M23 id=15189719 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
peptidase M23
GWB1_OD1_49_6_GWB1_scaffold_3683_18
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(18971..19630)
DNA (660bp) protein (220aa)
rpiY; 50S ribosomal protein L25 (general stress protein Ctc); K02897 large subunit ribosomal protein L25 Tax=GWB1_OD1_49_6_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=15189720 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rpiY; 50S ribosomal protein L25 (general stress protein Ctc)
GWB1_OD1_49_6_GWB1_scaffold_3683_19
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

19835..20389
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A0FA1
rfaE bifunctional protein, domain II Tax=GWB1_OD1_49_6_curated
rfaE bifunctional protein, domain II
GWB1_OD1_49_6_GWB1_scaffold_3683_20
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

20386..21207
DNA (822bp) protein (274aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=GWB1_OD1_49_6_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037094DE
cmp/dcmp deaminase zinc-binding protein
GWB1_OD1_49_6_GWB1_scaffold_3683_21

Not on your lists

21231..21707
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW17134.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
id=3422916 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
GWB1_OD1_49_6_GWB1_scaffold_3683_22
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(21724..22161)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036BF6B7
hypothetical protein Tax=GWB1_OD1_49_6_curated
GWB1_OD1_49_6_GWB1_scaffold_3683_23

Not on your lists

comp(22225..22773)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037D6F4B
Dihydrofolate reductase {ECO:0000313|EMBL:KKW17136.1}; TaxID=1618798 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_50_14.;"
dihydrofolate reductase
GWB1_OD1_49_6_GWB1_scaffold_3683_24
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(22897..23724)
DNA (828bp) protein (276aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=GWB1_OD1_49_6_curated
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=15190561 bin=GWB1_SUB10_ACD81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
thyA; thymidylate synthase (EC:2.1.1.45)
GWB1_OD1_49_6_GWB1_scaffold_3683_25
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(23897..24628)
DNA (732bp) protein (244aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=GWB1_OD1_49_6_curated
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] id=15189729 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tagatose-bisphosphate aldolase
Displaying 27 items

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