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GWB1_Spirochaetes_59_5_GWB1_scaffold_2557

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_1
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3..899)
DNA (897bp) protein (299aa)
(Uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWB1_Spirochaetes_59_5_curated
(Uracil-5)-methyltransferase id=3426983 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
(Uracil-5)-methyltransferase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_2
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(903..1865)
DNA (963bp) protein (321aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Putative uncharacterized protein id=3426988 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_3
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2255..4174)
DNA (1920bp) protein (640aa)
hypothetical protein Tax=GWB1_Spirochaetes_59_5_curated
Putative uncharacterized protein id=3426991 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4516..4953)
DNA (438bp) protein (146aa)
Response regulator receiver protein id=3426994 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
response regulator receiver protein Tax=GWB1_Spirochaetes_59_5_curated
response regulator receiver protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_5
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(5128..5319)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 id=3426997 bin=GWB1_Spirochaetes_59_5 species=unknown genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=GWB1_Spirochaetes_59_5_curated
rpmB; 50S ribosomal protein L28
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_6
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(5441..6766)
DNA (1326bp) protein (442aa)
Signal recognition particle protein id=3427000 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=GWB1_Spirochaetes_59_5_curated
signal recognition particle protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_7
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6766..7332)
DNA (567bp) protein (189aa)
Metal dependent phosphohydrolase id=3427003 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
metal dependent phosphohydrolase Tax=GWB1_Spirochaetes_59_5_curated
metal dependent phosphohydrolase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_8
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7405..8538
DNA (1134bp) protein (378aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=3427006 bin=GWB1_Spirochaetes_59_5 species=Halomonas sp. KM-1 genus=Halomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
PAS domain S-box Tax=GWB1_Spirochaetes_59_5_curated
PAS domain S-box
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_9
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(9301..10143)
DNA (843bp) protein (281aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=GWB1_Spirochaetes_59_5_curated
Biotin/lipoate A/B protein ligase id=3427012 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
biotin/lipoate A/B protein ligase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_10
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10146..10448)
DNA (303bp) protein (101aa)
hypothetical protein TpriZ_13154 id=3427015 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein TpriZ_13154 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_11
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10445..11398)
DNA (954bp) protein (318aa)
Lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=GWB1_Spirochaetes_59_5_curated
Lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase id=3427018 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_12
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11401..11991)
DNA (591bp) protein (197aa)
TetR family transcriptional regulator Tax=GWB1_Spirochaetes_59_5_curated
Regulatory protein TetR id=3427021 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
TetR family transcriptional regulator
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_13
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12115..12741
DNA (627bp) protein (209aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3427025 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=GWB1_Spirochaetes_59_5_curated
HAD-superfamily hydrolase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_14
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12775..13287
DNA (513bp) protein (171aa)
id=3427028 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
id=3427028 Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_15
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13312..13557)
DNA (246bp) protein (82aa)
Tax=GWB1_Spirochaetes_59_5_curated
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_16
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13566..14147)
DNA (582bp) protein (194aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=GWB1_Spirochaetes_59_5_curated
Lipoprotein signal peptidase id=3427029 bin=GWB1_Spirochaetes_59_5 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
lipoprotein signal peptidase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_17
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14158..14919)
DNA (762bp) protein (254aa)
NGG1p interacting factor 3 protein, NIF3 id=3427033 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
NGG1p interacting factor 3 protein, NIF3 Tax=GWB1_Spirochaetes_59_5_curated
NGG1p interacting factor 3 protein, NIF3
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_18
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14995..15918)
DNA (924bp) protein (308aa)
NagC family transcriptional regulator id=3427036 bin=GWB1_Spirochaetes_59_5 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
NagC family transcriptional regulator Tax=GWB1_Spirochaetes_59_5_curated
NagC family transcriptional regulator
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_19
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15915..17354)
DNA (1440bp) protein (480aa)
fumarate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=GWB1_Spirochaetes_59_5_curated
Fumarate lyase id=3427039 bin=GWB1_Spirochaetes_59_5 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
fumarate lyase
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_20
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17390..18370)
DNA (981bp) protein (327aa)
Amidohydrolase 2 id=3427042 bin=GWB1_Spirochaetes_59_5 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
amidohydrolase 2; K07045 Tax=GWB1_Spirochaetes_59_5_curated
amidohydrolase 2
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_21
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18374..19201)
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component id=3427045 bin=GWB1_Spirochaetes_59_5 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=GWB1_Spirochaetes_59_5_curated
binding-protein-dependent transport system inner membrane protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_22
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19204..20097)
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component id=3427048 bin=GWB1_Spirochaetes_59_5 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein Tax=GWB1_Spirochaetes_59_5_curated
binding-protein-dependent transport system inner membrane protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_23
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20170..21423)
DNA (1254bp) protein (418aa)
Extracellular solute-binding protein family 1 id=3427051 bin=GWB1_Spirochaetes_59_5 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=GWB1_Spirochaetes_59_5_curated
extracellular solute-binding protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_24
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21558..22667)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein id=3427056 bin=GWB1_Spirochaetes_59_5 species=Subdoligranulum sp. 4_3_54A2FAA genus=Subdoligranulum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative transcriptional repressor protein Tax=GWB1_Spirochaetes_59_5_curated
transcriptional repressor protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_25
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22791..23468)
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=3427129 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=GWB1_Spirochaetes_59_5_curated
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_26
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23652..25004)
DNA (1353bp) protein (451aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3); K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=GWB1_Spirochaetes_59_5_curat
Putative uncharacterized protein id=3427132 bin=GWB1_Spirochaetes_59_5 species=Clostridium asparagiforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_27
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24997..25683)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family id=3427136 bin=GWB1_Spirochaetes_59_5 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
winged helix family two component transcriptional regulator; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWB1_Spirochaetes_59_5_curated
winged helix family two component transcriptional regulator
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_28
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25692..26810)
DNA (1119bp) protein (373aa)
Tobe domain family id=3427138 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
tobe domain family Tax=GWB1_Spirochaetes_59_5_curated
tobe domain family
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_29
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(26812..28605)
DNA (1794bp) protein (598aa)
ABC transporter, permease protein id=3427140 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease; K02011 iron(III) transport system permease protein Tax=GWB1_Spirochaetes_59_5_curated
ABC transporter permease
GWB1_Spirochaetes_59_5_GWB1_scaffold_2557_30
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28672..29805)
DNA (1134bp) protein (378aa)
Conserved hypothetical ABC transporter periplasmic solute-binding protein id=3427142 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative ABC transporter periplasmic solute-binding protein; K02012 iron(III) transport system substrate-binding protein Tax=GWB1_Spirochaetes_59_5_curated
putative ABC transporter periplasmic solute-binding protein rbh
Displaying items 1-30 of 35 in total

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