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GWB1_Spirochaetes_66_5_GWB1_scaffold_13248

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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733..1221
DNA (489bp) protein (163aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17) Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B7575D
xylose ABC transporter ATP-binding protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1218..2162
DNA (945bp) protein (315aa)
RbsC n=1 Tax=Treponema primitia RepID=UPI000255547B
monosaccharide-transporting ATPase; K10440 ribose transport system permease protein Tax=RBG_16_Spirochaete_67_19_curated
inner-membrane translocator
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2358..3500
DNA (1143bp) protein (381aa)
Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3566..4213
DNA (648bp) protein (216aa)
ABC-type sugar transport system n=3 Tax=Vibrio mimicus RepID=D2Y9S3_VIBMI
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein Tax=RBG_16_Spirochaete_67_19_curated
LacI family transcriptional regulator
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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4191..4475
DNA (285bp) protein (95aa)
Putative Periplasmic sugar-binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ER47_9CLOT
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein Tax=RBG_16_Spirochaete_67_19_curated
periplasmic binding protein/LacI transcriptional regulator
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4607..6277
DNA (1671bp) protein (557aa)
Putative Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FM46_9CLOT
ABC transporter; K10440 ribose transport system permease protein Tax=RBG_16_Spirochaete_67_19_curated
ABC transporter
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(6231..6908)
DNA (678bp) protein (226aa)
putative major facilitator superfamily transporter Tax=RBG_16_Spirochaete_67_19_curated
major facilitator superfamily protein id=4323617 bin=GWC2_Planctomycetes_45_44 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
putative major facilitator superfamily transporter
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6962..7291
DNA (330bp) protein (110aa)
Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_9
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7322..8488
DNA (1167bp) protein (389aa)
Creatinase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B620_RUMGN
Xaa-Pro aminopeptidase Tax=RBG_16_Spirochaete_67_19_curated
Xaa-Pro aminopeptidase
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_10
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8554..9288)
DNA (735bp) protein (245aa)
UPI0003CF78CC related cluster n=1 Tax=unknown RepID=UPI0003CF78CC
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9934..11109
DNA (1176bp) protein (392aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBM5_THENN
Extracellular solute-binding protein family 1 precursor Tax=RBG_16_Spirochaete_67_19_curated
Extracellular solute-binding protein family 1 precursor
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11116..11997
DNA (882bp) protein (294aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBM4_THENN
Binding-protein-dependent transport systems inner membrane component precursor Tax=RBG_16_Spirochaete_67_19_curated
Binding-protein-dependent transport systems inner membrane component precursor
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_13
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11994..12821
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBM3_THENN
Binding-protein-dependent transport systems inner membrane component precursor Tax=RBG_16_Spirochaete_67_19_curated
Binding-protein-dependent transport systems inner membrane component precursor
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_14
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12766..13413)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida S11 RepID=J8V402_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EJT84519.1}; TaxID=1218169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_15
unknown

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comp(13401..13592)
DNA (192bp) protein (64aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_16
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13937..14686
DNA (750bp) protein (250aa)
beta-lactamase domain-containing protein; K00784 ribonuclease Z [EC:3.1.26.11] Tax=RBG_16_Spirochaete_67_19_curated
Beta-lactamase domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIF9_ROSCS
beta-lactamase domain-containing protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_17
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14713..14904)
DNA (192bp) protein (64aa)
Oxidoreductase domain protein Tax=RBG_16_Spirochaete_67_19_curated
Oxidoreductase domain protein id=2559330 bin=GWC2_Spirochaete_52_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_18
unknown

Not on your lists

15116..15814
DNA (699bp) protein (233aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_19
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15691..16548)
DNA (858bp) protein (286aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KH21_MESAW
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=RBG_16_Spirochaete_67_19_curated
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_20
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16562..17377)
DNA (816bp) protein (272aa)
ABC transporter ATP-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K4I1_9RHOB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EBA07880.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittul
taurine transport ATP-binding protein TauB
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_21

Not on your lists

comp(17460..17723)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003711E0B
Uncharacterized protein {ECO:0000313|EMBL:KKK77471.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_22
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18523..19527
DNA (1005bp) protein (335aa)
Oxidoreductase, Gfo/Idh/MocA family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C2A4_9PLAN
yjhC; putative dehydrogenases and related proteins Tax=RBG_16_Spirochaete_67_19_curated
Oxidoreductase, NAD-binding
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_23
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19529..19876
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C1F4_9PLAN
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_24
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19873..21039
DNA (1167bp) protein (389aa)
peptidase M24 Tax=RBG_16_Spirochaete_67_19_curated
Creatinase id=4127469 bin=GWC2_Planctomycetes_45_44 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
peptidase M24
GWB1_Spirochaetes_66_5_GWB1_scaffold_13248_25
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21036..21239
DNA (204bp) protein (68aa)
peptidase, M20A family protein; K01438 acetylornithine deacetylase [EC:3.5.1.16] Tax=RBG_16_Spirochaete_67_19_curated
Displaying 25 items

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