ggKbase home page

GWB1_Spirochaetes_66_5_GWB1_scaffold_5850

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2..352
DNA (351bp) protein (117aa)
xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] Tax=RBG_16_Spirochaete_67_19_curated
xylose isomerase (EC:5.3.1.5)
Xylose isomerase, putative n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAD2_DICT6
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

702..1526
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00036FC892
N-acylglucosamine 2-epimerase Tax=RBG_16_Spirochaete_67_19_curated
N-acylglucosamine 2-epimerase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1553..2464)
DNA (912bp) protein (304aa)
PfkB domain protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R7R4_PIRSD
PfkB domain-containing protein Tax=RBG_16_Spirochaete_67_19_curated
PfkB domain-containing protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2503..3327)
DNA (825bp) protein (275aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RBG_16_Spirochaete_67_19_curated
A/G-specific adenine glycosylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV4_RHOMR
A/G-specific adenine glycosylase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_5
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(3578..5350)
DNA (1773bp) protein (591aa)
Aspartate--tRNA ligase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RAH7_SPISS
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ADK79468.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5417..6457
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJZ3_9SPIO
putative amidohydrolase Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6473..6886
DNA (414bp) protein (138aa)
rhodanese-like protein Tax=RBG_16_Spirochaete_67_19_curated
Sulfurtransferase id=2986228 bin=GWF1_Spirochaetes_60_12 species=Oscillibacter valericigenes genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Rhodanese-like domain containing protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6905..8104)
DNA (1200bp) protein (400aa)
flavodoxin/nitric oxide synthase Tax=RBG_16_Spirochaete_67_19_curated
Flavodoxin/nitric oxide synthase id=8266997 bin=CD_OP8_4m species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
flavodoxin/nitric oxide synthase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_9
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8221..8709)
DNA (489bp) protein (163aa)
id=2164807 Tax=RBG_16_Spirochaete_67_19_curated
id=2164807 bin=GWE2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_10
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9267..9497
DNA (231bp) protein (77aa)
LuxR family transcriptional regulator Tax=RBG_16_Spirochaete_67_19_curated
Transcriptional regulator id=3199512 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
two component LuxR family transcriptional regulator
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_11
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9518..10042
DNA (525bp) protein (175aa)
Metal dependent phosphohydrolase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZHP1_METPB
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACB81359.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methy
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10039..10335
DNA (297bp) protein (99aa)
UPF0235 protein Glov_0413 n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1P9_GEOLS
hypothetical protein; K09131 hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_13
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10307..11431
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00037A7974
inorganic pyrophosphatase/exopolyphosphatase Tax=RBG_16_Spirochaete_67_19_curated
inorganic pyrophosphatase/exopolyphosphatase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_14
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11428..12120
DNA (693bp) protein (231aa)
aat; leucyl/phenylalanyl-tRNA-protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] Tax=RBG_16_Spirochaete_67_19_curated
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LNU5_DESBD
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_15
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12265..12717
DNA (453bp) protein (151aa)
Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_16
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12778..14319)
DNA (1542bp) protein (514aa)
xylulose kinase; K00854 xylulokinase [EC:2.7.1.17] Tax=RBG_16_Spirochaete_67_19_curated
Putative gluconate kinase id=3906019 bin=GWB1_Spirochaetes_59_5 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
xylulose kinase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_17
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14333..15100)
DNA (768bp) protein (256aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) Tax=RBG_16_Spirochaete_67_19_curated
Short-chain dehydrogenase/reductase SDR id=2475231 bin=GWA1_Treponema_62_8 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
short-chain dehydrogenase/reductase SDR
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_18
unknown

Not on your lists

15329..15508
DNA (180bp) protein (60aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_19
unknown

Not on your lists

15533..15667
DNA (135bp) protein (45aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16104..17156
DNA (1053bp) protein (351aa)
putative monosaccharide-transporting ATPase n=1 Tax=Treponema primitia RepID=UPI000255547D
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein Tax=RBG_16_Spirochaete_67_19_curated
ribose ABC transporter substrate-binding protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17239..18153
DNA (915bp) protein (305aa)
RbsC n=1 Tax=Treponema primitia RepID=UPI000255547B
AraH; ribose/xylose/arabinose/galactoside ABC-type transporter permease; K10440 ribose transport system permease protein Tax=RBG_16_Spirochaete_67_19_curated
AraH; ribose/xylose/arabinose/galactoside ABC transporter permease
GWB1_Spirochaetes_66_5_GWB1_scaffold_5850_22
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

Not on your lists

comp(18635..19702)
DNA (1068bp) protein (356aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=GWE2_Tenericutes_38_8_curated
ppdK; Pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase id=4192944 bin=GWF2_Tenericutes_35_184 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Displaying 22 items

View Taxonomy