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GWB1_Spirochaetes_66_5_GWB1_scaffold_7318

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(87..722)
DNA (636bp) protein (212aa)
FAD dependent oxidoreductase Tax=RBG_16_Spirochaete_67_19_curated
FAD dependent oxidoreductase id=2778159 bin=GWF1_Spirochaetes_51_8 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
FAD dependent oxidoreductase
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(827..1915)
DNA (1089bp) protein (363aa)
Two-component transcriptional regulatory protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G7K7_9DELT
two-component transcriptional regulatory protein; K07814 putative two-component system response regulator Tax=RBG_16_Spirochaete_67_19_curated
two-component transcriptional regulatory protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1912..5022)
DNA (3111bp) protein (1037aa)
putative PAS/PAC sensor protein Tax=RBG_16_Spirochaete_67_19_curated
Multi-sensor hybrid histidine kinase id=2201427 bin=GWB2_Desulfobacterales_56_26 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
PAS domain-containing protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5673..6080)
DNA (408bp) protein (136aa)
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSJ5_9BACT
response regulator receiver protein Tax=RBG_16_Spirochaete_67_19_curated
response regulator receiver protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6177..6809)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y743_LEPCP
two component LuxR family transcriptional regulator Tax=RBG_16_Spirochaete_67_19_curated
two component LuxR family transcriptional regulator
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6806..7366)
DNA (561bp) protein (187aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NC5_SOLUE
PAS domain-containing protein Tax=RBG_16_Spirochaete_67_19_curated
integral membrane sensor signal transduction histidine kinase
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_7
unknown

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8155..8916
DNA (762bp) protein (254aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_8
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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10464..11789
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00037CE500
aminopeptidase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
aminopeptidase
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_9
unknown

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11918..12289
DNA (372bp) protein (124aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_10
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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12321..12608
DNA (288bp) protein (96aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6C2B9_DESAD
methylated-DNA-(protein)-cysteine S-methyltransferase
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding {ECO:0000313|EMBL:ACS81320.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrion
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_11
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12648..13142)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L3I5_SAPGL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC24933.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (st
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_12
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13227..14030)
DNA (804bp) protein (268aa)
exodeoxyribonuclease III Xth (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035D884F
exodeoxyribonuclease III Xth
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14073..15461
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00035C1982
Pyridoxal-dependent decarboxylase rbh
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:AHG93575.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_14
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15823..16557
DNA (735bp) protein (245aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HS53_9FIRM
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:EAX47118.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source=
(Fe-S)-binding protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_15
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

16903..17349
DNA (447bp) protein (149aa)
hypothetical protein Tax=RBG_13_Aminicenantes_63_10_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_16

Not on your lists

17357..18460
DNA (1104bp) protein (368aa)
hypothetical protein n=2 Tax=unclassified candidate division EM 19 RepID=UPI0003816265
Uncharacterized protein {ECO:0000313|EMBL:KKK52710.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative trimethylamine corrinoid protein 2
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_17
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

18600..19604
DNA (1005bp) protein (335aa)
cytoplasmic protein Tax=RBG_13_Aminicenantes_62_12_curated
id=16829895 bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_18
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

19665..21149
DNA (1485bp) protein (495aa)
two component system sensor histidine kinase (EC:2.7.13.3) id=16829896 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
two component sensor histidine kinase Tax=RBG_13_Aminicenantes_59_9_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_19
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21128..21679
DNA (552bp) protein (184aa)
two component system sensor histidine kinase (EC:2.7.13.3) id=16829896 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
two component sensor histidine kinase Tax=RBG_16_Spirochaete_67_19_curated
histidine kinase
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21676..22389
DNA (714bp) protein (238aa)
two component signal transduction response regulator Tax=RBG_16_Spirochaete_67_19_curated
Winged-helix transcriptional response regulator id=2706172 bin=GWF2_Lentisphaerae_57_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
winged-helix transcriptional response regulator
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22386..23318
DNA (933bp) protein (311aa)
Chaperonin HslO n=1 Tax=delta proteobacterium NaphS2 RepID=D8F984_9DELT
Hsp33 protein; K04083 molecular chaperone Hsp33 Tax=RBG_16_Spirochaete_67_19_curated
Hsp33 protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_22
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23328..23735)
DNA (408bp) protein (136aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKZ4_GEOS8
dinitrogenase iron-molybdenum cofactor biosynthesis protein Tax=RBG_16_Spirochaete_67_19_curated
dinitrogenase iron-molybdenum cofactor biosynthesis protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_23
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23732..24163)
DNA (432bp) protein (144aa)
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
UPF0251 protein Cvib_0740 id=2632035 bin=GWC1_Spirochaetes_27_15 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_24
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

24261..24794
DNA (534bp) protein (178aa)
msrA1; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=RBG_16_Spirochaete_67_19_curated
msrA1; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00030F62B5
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_25
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24859..25434)
DNA (576bp) protein (192aa)
Rubrerythrin n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3N1_SPICH
Rubrerythrin Tax=RBG_16_Spirochaete_67_19_curated
Rubrerythrin
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_26
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25463..25867)
DNA (405bp) protein (135aa)
Ferric uptake regulator, Fur family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDC3_DESAR
ferric uptake regulator, Fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RBG_16_Spirochaete_67_19_curated
ferric uptake regulator, Fur family
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_27
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25917..26777)
DNA (861bp) protein (287aa)
Nuclease (SNase domain-containing protein) n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F186_SPICH
nuclease Tax=RBG_16_Spirochaete_67_19_curated
nuclease
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_28
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26824..27330
DNA (507bp) protein (169aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YDX1_TREAZ
resA; thiol-disulfide oxidoreductase ResA Tax=RBG_16_Spirochaete_67_19_curated
resA; thiol-disulfide oxidoreductase ResA
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_29
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27426..28751
DNA (1326bp) protein (442aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKI2_DESTT
diguanylate cyclase Tax=RBG_16_Spirochaete_67_19_curated
diguanylate cyclase
GWB1_Spirochaetes_66_5_GWB1_scaffold_7318_30
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28762..29112)
DNA (351bp) protein (117aa)
cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17] Tax=RBG_16_Spirochaete_67_19_curated
Cob(I)alamin adenosyltransferase id=4833409 bin=GWC2_Pelobacter_58_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
Displaying 30 items

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