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GWB1_Spirochaetes_66_5_GWB1_scaffold_5640

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3..734)
DNA (732bp) protein (244aa)
coproporphyrinogen III oxidase (EC:1.3.1.-); K00224 [EC:1.3.1.-] Tax=RBG_16_Spirochaete_67_19_curated
Fe-S oxidoreductase, coproporphyrinogen III oxidase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C3U7_DESTA
Fe-S oxidoreductase, coproporphyrinogen III oxidase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_2
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(867..2216)
DNA (1350bp) protein (450aa)
cytochrome b/b6 domain-containing protein Tax=RBG_16_Spirochaete_67_19_curated
cytochrome b/b6 domain-containing protein id=14631137 bin=bin9_gal15 species=Leifsonia aquatica genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
cytochrome b/b6 domain-containing protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_3
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2230..2631)
DNA (402bp) protein (134aa)
response regulator receiver protein Tax=RBG_16_Spirochaete_67_19_curated
Response regulator receiver protein id=3415301 bin=GWA1_Deltaproteobacteria_52_35 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
response regulator receiver protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_4
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2635..4029)
DNA (1395bp) protein (465aa)
periplasmic sensor signal transduction histidine kinase Tax=RBG_16_Spirochaete_67_19_curated
Periplasmic sensor signal transduction histidine kinase id=3415303 bin=GWA1_Deltaproteobacteria_52_35 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
periplasmic sensor signal transduction histidine kinase
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4033..4485)
DNA (453bp) protein (151aa)
Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_6
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4507..5601)
DNA (1095bp) protein (365aa)
ferredoxin--NAD(+) reductase (EC:1.18.1.3); K00351 Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:1.6.5.-] Tax=RBG_16_Spirochaete_67_19_curated
ferredoxin--NAD(+) reductase (EC:1.18.1.3)
Oxidoreductase FAD/NAD(P)-binding domain protein id=3882021 bin=GWF2_OP3_43_52 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_7
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5611..6201)
DNA (591bp) protein (197aa)
RnfA-Nqr electron transport subunit; K00350 Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:1.6.5.-] Tax=RBG_16_Spirochaete_67_19_curated
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Clostridium ultunense Esp RepID=M1ZLR1_9CLOT
RnfA-Nqr electron transport subunit
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6198..6308)
DNA (111bp) protein (37aa)
nqrD; Na(+)-translocating NADH-quinone reductase subunit D (EC:1.6.5.-); K00349 Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:1.6.5.-] Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_9
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(7506..8594)
DNA (1089bp) protein (363aa)
RnfABCDGE type electron transport complex subunit D; K00347 Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:1.6.5.-] Tax=RBG_16_Spirochaete_67_19_curated
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUB7_ACEAZ
RnfABCDGE type electron transport complex subunit D
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_10
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8591..9952)
DNA (1362bp) protein (454aa)
Electron transport complex protein RnfC n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJV3_9BACT
Na-translocating NADH-quinone reductase subunit A Tax=RBG_16_Spirochaete_67_19_curated
Na-translocating NADH-quinone reductase subunit A
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_11
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10086..10451
DNA (366bp) protein (122aa)
response regulator id=162386 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
response regulator receiver sensor signal transduction histidine kinase
Tax=RBG_16_Spirochaete_67_19_curated
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_12
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10575..13694
DNA (3120bp) protein (1040aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV62_ROSS1
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_13
unknown

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comp(13838..14296)
DNA (459bp) protein (153aa)

This feature has no annotations

GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_14
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14348..15106)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. HPB0071 RepID=N2J839_9PSED
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
GWB1_Spirochaetes_66_5_GWB1_scaffold_5640_15
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15289..16110
DNA (822bp) protein (274aa)
selenophosphate synthase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RBG_16_Spirochaete_67_19_curated
Selenide, water dikinase n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z9P0_PHOPR
selenide, water dikinase
Displaying 15 items

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