ggKbase home page

GWB1_Spirochaete_62_6_GWB1_scaffold_3330

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_1
unknown

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=3643709 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Putative uncharacterized protein id=3643709 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_2
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(240..881)
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3643707 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:AEJ20809.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldariu
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_3
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(891..1529)
DNA (639bp) protein (213aa)
Methyl-accepting chemotaxis sensory transducer id=3643705 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEJ20808.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (s
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_4
Bacillus isronensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1581..2372)
DNA (792bp) protein (264aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1224748 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae
Putative ribosome biogenesis GTPase RsgA id=3643703 bin=GWA1_Treponema_62_8 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GTPase
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_5
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(2733..3602)
DNA (870bp) protein (290aa)
Putative uncharacterized protein id=3643699 bin=GWA1_Treponema_62_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Putative uncharacterized protein Tax=GWC1_Treponema_61_84_curated
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_6
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(3673..4611)
DNA (939bp) protein (313aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain id=3643697 bin=GWA1_Treponema_62_8 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Tax=GWC1_Treponema_61_84_curated
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_7
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(4629..6980)
DNA (2352bp) protein (784aa)
major facilitator superfamily protein Tax=GWC1_Treponema_61_84_curated
Major facilitator superfamily MFS_1 id=3643693 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
major facilitator superfamily protein
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_8
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(7043..8815)
DNA (1773bp) protein (591aa)
methyl-accepting chemotaxis protein Tax=GWC1_Treponema_61_84_curated
methyl-accepting chemotaxis protein id=3643692 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
methyl-accepting chemotaxis protein
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(8986..9579)
DNA (594bp) protein (198aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWC1_Treponema_61_84_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=3643691 bin=GWA1_Treponema_62_8 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_10
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(9599..10609)
DNA (1011bp) protein (337aa)
dihydroorotate dehydrogenase family protein (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWC1_Treponema_61_84_curated
dihydroorotate dehydrogenase family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase id=3643690 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_11
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(10602..11402)
DNA (801bp) protein (267aa)
Dihydroorotate dehydrogenase, electron transfer subunit n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y9D7_TREAZ
dihydroorotate dehydrogenase, electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=GWC1_Treponema_61_84_curated
dihydroorotate dehydrogenase, electron transfer subunit
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_12
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(11399..12358)
DNA (960bp) protein (320aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWC1_Treponema_61_84_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YIX8_TREPZ
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_13
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(12359..13087)
DNA (729bp) protein (243aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3] Tax=GWC1_Treponema_61_84_curated
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y9E3_TREAZ
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_14
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13259..14005)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJX4_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK17726.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_15
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

14108..15340
DNA (1233bp) protein (411aa)
hypothetical protein Tax=RBG_13_OP3X_46_9_curated
Uncharacterized protein id=3395232 bin=GWF2_Lentisphaerae_49_21 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_16
unknown

Not on your lists

comp(15157..15705)
DNA (549bp) protein (183aa)

This feature has no annotations

GWB1_Spirochaete_62_6_GWB1_scaffold_3330_17
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

16426..18024
DNA (1599bp) protein (533aa)
Tax=GWC2_ACD39_50_8_curated
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_18
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17873..18874)
DNA (1002bp) protein (334aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A7L5_MELRP
NAD-dependent epimerase/dehydratase Tax=RBG_16_Spirochaete_67_19_curated
NAD-dependent epimerase/dehydratase
GWB1_Spirochaete_62_6_GWB1_scaffold_3330_19
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18871..19050)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z817_DEHE1
hypothetical protein Tax=RBG_16_Spirochaete_67_19_curated
transcriptional regulator
Displaying 19 items

View Taxonomy