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GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_1
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)
Related to two-component system response regulator (Ntr family) id=2172863 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator Tax=GWB2_Desulfobacterales_56_26_curated
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_2
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162..1529)
DNA (1368bp) protein (456aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
Tax=GWB2_Desulfobacterales_56_26_curated
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1705..4005)
DNA (2301bp) protein (767aa)
Ntr two-component system sensor histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=GWB2_Desulfobacterales_56_26_curated
Related to two-component system sensor histidine kinase (Ntr family) id=2172864 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Ntr two-component system sensor histidine kinase
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4014..4592)
DNA (579bp) protein (193aa)
Putative uncharacterized protein id=2172865 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_5
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4938..5327
DNA (390bp) protein (130aa)
Dinitrogenase iron-molybdenum cofactor protein id=2172866 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_6
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5486..5779
DNA (294bp) protein (98aa)
UPF0251 protein DP2820 id=2172867 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative DNA-binding protein Tax=GWB2_Desulfobacterales_56_26_curated
putative DNA-binding protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_7
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5822..7408)
DNA (1587bp) protein (529aa)
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=GWB2_Desulfobacterales_56_26_curated
Peptide chain release factor 3 id=2172895 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
prfC; peptide chain release factor 3
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7526..8650
DNA (1125bp) protein (375aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) Tax=GWB2_Desulfobacterales_56_26_curated
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase id=2172896 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8647..9192
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase id=2172897 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=GWB2_Desulfobacterales_56_26_curated
dTDP-4-dehydrorhamnose 3,5-epimerase
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_10
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9219..9440
DNA (222bp) protein (74aa)
hypothetical protein id=2172898 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9497..11398)
DNA (1902bp) protein (634aa)
PAS/PAC sensor hybrid histidine kinase Tax=GWB2_Desulfobacterales_56_26_curated
PAS/PAC sensor hybrid histidine kinase id=2172899 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
PAS/PAC sensor hybrid histidine kinase
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11641..11886)
DNA (246bp) protein (82aa)
hypothetical protein id=2172901 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_13
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12347..13093)
DNA (747bp) protein (249aa)
Probable phosphatase Sama_2233 id=2172902 bin=GWB2_Desulfobacterales_56_26 species=Shewanella amazonensis genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
PHP domain-containing protein; K04477 putative hydrolase Tax=GWB2_Desulfobacterales_56_26_curated
PHP domain-containing protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_14
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13151..13573)
DNA (423bp) protein (141aa)
Putative uncharacterized protein id=2172903 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_15
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13731..14054)
DNA (324bp) protein (108aa)
hypothetical protein id=2172904 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
cytochrome c553 Tax=GWB2_Desulfobacterales_56_26_curated
cytochrome c553
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_16
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14112..15428)
DNA (1317bp) protein (439aa)
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase id=2172905 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) Tax=GWB2_Desulfobacterales_56_26_curated
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_17
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15418..17967)
DNA (2550bp) protein (850aa)
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
Putative uncharacterized protein id=2172906 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_18
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18266..19258
DNA (993bp) protein (331aa)
Putative uncharacterized protein id=2172907 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Localisation of periplasmic protein complexes Tax=GWB2_Desulfobacterales_56_26_curated
Localisation of periplasmic protein complexes
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_19
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19263..20084)
DNA (822bp) protein (274aa)
hypothetical protein id=2172908 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_20
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20065..21792)
DNA (1728bp) protein (576aa)
tetratricopeptide repeat protein Tax=GWB2_Desulfobacterales_56_26_curated
Tetratricopeptide TPR_1 repeat-containing protein id=2172909 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
tetratricopeptide repeat protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_21
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21800..22438)
DNA (639bp) protein (213aa)
thymidylate kinase (EC:2.7.4.9) Tax=GWB2_Desulfobacterales_56_26_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase id=2172910 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_22
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22449..23450)
DNA (1002bp) protein (334aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=GWB2_Desulfobacterales_56_26_curated
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase id=2172911 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_23
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23567..23938)
DNA (372bp) protein (124aa)
UPF0102 protein DaAHT2_1166 id=2172912 bin=GWB2_Desulfobacterales_56_26 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein; K07460 putative endonuclease Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_24
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23928..24569)
DNA (642bp) protein (214aa)
RNase HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWB2_Desulfobacterales_56_26_curated
RNase HII (EC:3.1.26.4)
Ribonuclease HII id=2172914 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_25
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24758..25108)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 id=2172916 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
ribosomal protein L19 Tax=GWB2_Desulfobacterales_56_26_curated
ribosomal protein L19
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_26
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25176..25745)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=2172918 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_27
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25729..26508)
DNA (780bp) protein (260aa)
tRNA (guanine-N(1)-)-methyltransferase id=2172922 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
tRNA (guanine-N1)-methyltransferase Tax=GWB2_Desulfobacterales_56_26_curated
tRNA (guanine-N1)-methyltransferase
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_28
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26527..27078)
DNA (552bp) protein (184aa)
Related to 16S rRNA processing protein RimM id=2172924 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
16S rRNA processing protein RimM Tax=GWB2_Desulfobacterales_56_26_curated
16S rRNA processing protein RimM
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_29
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27113..27343)
DNA (231bp) protein (77aa)
UPF0109 protein DP2801 id=2172929 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative RNA-binding protein (contains KH domain) Tax=GWB2_Desulfobacterales_56_26_curated
putative RNA-binding protein (contains KH domain)
GWB2_Desulfobacterales_56_26_gwb2_scaffold_4023_30

Not on your lists


comp(27346..27594)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=uncultured bacterium RepID=K1XXD3_9BACT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SSU ribosomal protein S16P
Displaying items 1-30 of 31 in total

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