ggKbase home page

GWB2_DPX2_65_81_gwb2_scaffold_4107

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_DPX2_65_81_gwb2_scaffold_4107_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..221)
DNA (219bp) protein (73aa)
hypothetical protein id=2177529 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Sodium/hydrogen exchanger Tax=GWA2_Deltaproteobacteria_65_63_curated
GWB2_DPX2_65_81_gwb2_scaffold_4107_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(262..2046)
DNA (1785bp) protein (595aa)
Cl-channel voltage-gated family protein id=3130949 bin=GWC2_Deltaproteobacteria_66_88 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family Tax=GWA2_Deltaproteobacteria_65_63_curated
Cl-channel voltage-gated family protein
GWB2_DPX2_65_81_gwb2_scaffold_4107_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2122..2664
DNA (543bp) protein (181aa)
Transcriptional regulator, MarR family id=3719968 bin=GWA2_Deltaproteo_65_63 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
MarR family transcriptional regulator Tax=GWA2_Deltaproteobacteria_65_63_curated
MarR family transcriptional regulator
GWB2_DPX2_65_81_gwb2_scaffold_4107_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2661..4931
DNA (2271bp) protein (757aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=GWA2_Deltaproteobacteria_65_63_curated
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=3130957 bin=GWC2_Deltaproteobacteria_66_88 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWB2_DPX2_65_81_gwb2_scaffold_4107_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4928..5716
DNA (789bp) protein (263aa)
trehalose-phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] Tax=GWA2_Deltaproteobacteria_65_63_curated
Trehalose-phosphatase id=2177535 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
HAD superfamily hydrolase
GWB2_DPX2_65_81_gwb2_scaffold_4107_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5713..6366
DNA (654bp) protein (218aa)
Hypothetical cytosolic protein id=2177536 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein Tax=GWA2_Deltaproteobacteria_65_63_curated
cytoplasmic protein
GWB2_DPX2_65_81_gwb2_scaffold_4107_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6363..7601
DNA (1239bp) protein (413aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] Tax=GWA2_Deltaproteobacteria_65_63_curated
Glycosyl transferase, group 1 id=2177537 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
group 1 glycosyl transferase
GWB2_DPX2_65_81_gwb2_scaffold_4107_trna_1
unknown

Not on your lists

comp(7614..7703)
DNA (90bp)
transferRNA
GWB2_DPX2_65_81_gwb2_scaffold_4107_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7751..9193
DNA (1443bp) protein (481aa)
Phospholipase D/Transphosphatidylase id=3130970 bin=GWC2_Deltaproteobacteria_66_88 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase Tax=GWA2_Deltaproteobacteria_65_63_curated
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
GWB2_DPX2_65_81_gwb2_scaffold_4107_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9202..9648)
DNA (447bp) protein (149aa)
CMP/dCMP deaminase zinc-binding protein id=3131148 bin=GWC2_Deltaproteobacteria_66_88 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
CMP/dCMP deaminase zinc-binding protein Tax=GWA2_Deltaproteobacteria_65_63_curated
CMP/dCMP deaminase zinc-binding protein
GWB2_DPX2_65_81_gwb2_scaffold_4107_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9704..10297)
DNA (594bp) protein (198aa)
Uncharacterized protein id=2177540 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_4107_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10294..10818)
DNA (525bp) protein (175aa)
Putative uncharacterized protein id=2177592 bin=GWB2_Deltaproteobacteria_65_81 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Putative uncharacterized protein Tax=GWA2_Deltaproteobacteria_65_63_curated
GWB2_DPX2_65_81_gwb2_scaffold_4107_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10868..11446)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor id=2177593 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Deltaproteobacteria_65_63_curated
ECF subfamily RNA polymerase sigma-24 factor
GWB2_DPX2_65_81_gwb2_scaffold_4107_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11487..12020)
DNA (534bp) protein (178aa)
Rubrerythrin family protein id=2177594 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rubrerythrin family protein Tax=GWA2_Deltaproteobacteria_65_63_curated
rubrerythrin family protein
GWB2_DPX2_65_81_gwb2_scaffold_4107_14
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12059..12619
DNA (561bp) protein (187aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=CG_Delta_02
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 id=2177595 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWB2_DPX2_65_81_gwb2_scaffold_4107_15
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12726..13109)
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=2177596 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=CG_Delta_02
hypothetical protein
Displaying 16 items

View Taxonomy