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GWB2_DPX2_65_81_gwb2_scaffold_505

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_DPX2_65_81_gwb2_scaffold_505_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164..1051
DNA (888bp) protein (296aa)
Putative uncharacterized protein id=2213735 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_505_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1048..2010
DNA (963bp) protein (321aa)
ABC-type multidrug transport system, ATPase component id=2213737 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein Tax=GWA2_Deltaproteobacteria_65_63_curated
multidrug ABC transporter ATPase
GWB2_DPX2_65_81_gwb2_scaffold_505_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2012..2788
DNA (777bp) protein (259aa)
Putative ABC transport system, permease component id=2213739 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
putative ABC transporter permease Tax=GWA2_Deltaproteobacteria_65_63_curated
putative ABC transporter permease
GWB2_DPX2_65_81_gwb2_scaffold_505_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2862..3359
DNA (498bp) protein (166aa)
Putative uncharacterized protein id=2213741 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_505_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3356..3535
DNA (180bp) protein (60aa)
hypothetical protein id=2213743 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
GWB2_DPX2_65_81_gwb2_scaffold_505_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3539..4318
DNA (780bp) protein (260aa)
prepilin peptidase; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
Type 4 prepilin-like proteins leader peptide-processing enzyme id=2213745 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
prepilin peptidase
GWB2_DPX2_65_81_gwb2_scaffold_505_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4311..4748)
DNA (438bp) protein (146aa)
Putative TYPE 4 fimbrial BIOGENESIS TRANSMEMBRANE pilE-related PROTEIN id=2213747 bin=GWB2_Deltaproteobacteria_65_81 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
general secretion pathway protein H Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_505_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4745..5221)
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Putative uncharacterized protein id=2213749 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWB2_DPX2_65_81_gwb2_scaffold_505_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5293..6840
DNA (1548bp) protein (516aa)
histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
Integral membrane sensor signal transduction histidine kinase id=2335577 bin=GWA2_Deltaproteo_65_63 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
histidine kinase
GWB2_DPX2_65_81_gwb2_scaffold_505_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6833..8230
DNA (1398bp) protein (466aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2939789 bin=GWC2_Deltaproteobacteria_66_88 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
two component, sigma54 specific, Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=GWA2_Deltaproteobacteria_65_63_curated
sigma-54-dependent transcriptional response regulator
GWB2_DPX2_65_81_gwb2_scaffold_505_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8360..8587
DNA (228bp) protein (76aa)
Putative helix-turn-helix motif protein id=2335579 bin=GWA2_Deltaproteo_65_63 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
XRE family transcriptional regulator Tax=GWA2_Deltaproteobacteria_65_63_curated
XRE family transcriptional regulator
GWB2_DPX2_65_81_gwb2_scaffold_505_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8610..9671
DNA (1062bp) protein (354aa)
Type IV pilus assembly protein PilM id=2213757 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=GWA2_Deltaproteobacteria_65_63_curated
type IV pilus assembly protein PilM
GWB2_DPX2_65_81_gwb2_scaffold_505_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9668..10201
DNA (534bp) protein (178aa)
Fimbrial assembly id=2213759 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
fimbrial assembly; K02663 type IV pilus assembly protein PilN Tax=GWA2_Deltaproteobacteria_65_63_curated
pilN; type IV pilus biogenesis protein PilN
GWB2_DPX2_65_81_gwb2_scaffold_505_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10230..10850
DNA (621bp) protein (207aa)
Pilus assembly protein PilO id=2213761 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Pilus assembly protein PilO; K02664 type IV pilus assembly protein PilO Tax=GWA2_Deltaproteobacteria_65_63_curated
Pilus assembly protein PilO
GWB2_DPX2_65_81_gwb2_scaffold_505_15
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10847..11398
DNA (552bp) protein (184aa)
Putative Type IV pilus assembly protein PilP id=2213763 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
putative type IV pilus assembly protein PilP; K02665 type IV pilus assembly protein PilP Tax=GWA2_Deltaproteobacteria_65_63_curated
putative type IV pilus assembly protein PilP
GWB2_DPX2_65_81_gwb2_scaffold_505_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11401..13737
DNA (2337bp) protein (779aa)
pilQ; type IV pilus secretin PilQ; K02666 type IV pilus assembly protein PilQ Tax=GWA2_Deltaproteobacteria_65_63_curated
Type IV pilus secretin PilQ id=2213765 bin=GWB2_Deltaproteobacteria_65_81 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
pilQ; type IV pilus secretin PilQ
GWB2_DPX2_65_81_gwb2_scaffold_505_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13799..15010
DNA (1212bp) protein (404aa)
chorismate synthase; K01736 chorismate synthase [EC:4.2.3.5] Tax=GWA2_Deltaproteobacteria_65_63_curated
Chorismate synthase id=2213767 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Chorismate synthase
GWB2_DPX2_65_81_gwb2_scaffold_505_18
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15007..15567
DNA (561bp) protein (187aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=GWA2_Deltaproteobacteria_65_63_curated
shikimate kinase (EC:2.7.1.71)
Shikimate kinase id=2213769 bin=GWB2_Deltaproteobacteria_65_81 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWB2_DPX2_65_81_gwb2_scaffold_505_19
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15564..17345
DNA (1782bp) protein (594aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=GWA2_Deltaproteobacteria_65_63_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase id=2335589 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
GWB2_DPX2_65_81_gwb2_scaffold_505_20
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17332..17691
DNA (360bp) protein (120aa)
GTPase-activating protein, putative id=2335591 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
GTPase-activating protein Tax=GWA2_Deltaproteobacteria_65_63_curated
GTPase-activating protein
GWB2_DPX2_65_81_gwb2_scaffold_505_21
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17688..18161
DNA (474bp) protein (158aa)
3-dehydroquinate dehydratase id=2940072 bin=GWC2_Deltaproteobacteria_66_88 species=gamma proteobacterium HTCC5015 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
aroQ2; 3-dehydroquinate dehydratase Tax=GWA2_Deltaproteobacteria_65_63_curated
3-dehydroquinate dehydratase
GWB2_DPX2_65_81_gwb2_scaffold_505_22
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18205..19221
DNA (1017bp) protein (339aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=GWA2_Deltaproteobacteria_65_63_curated
Peptidase M24 id=2213775 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
peptidase M24
GWB2_DPX2_65_81_gwb2_scaffold_505_23
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19238..19795
DNA (558bp) protein (186aa)
Elongation factor P id=2213776 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
translation elongation factor P Tax=GWA2_Deltaproteobacteria_65_63_curated
translation elongation factor P
GWB2_DPX2_65_81_gwb2_scaffold_505_24
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19806..20255
DNA (450bp) protein (150aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein id=2213777 bin=GWB2_Deltaproteobacteria_65_81 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=GWA2_Deltaproteobacteria_65_63_curated
acetyl-CoA carboxylase, biotin carboxyl carrier protein
GWB2_DPX2_65_81_gwb2_scaffold_505_25
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20265..21602
DNA (1338bp) protein (446aa)
accC; acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=GWA2_Deltaproteobacteria_65_63_curated
Acetyl-CoA carboxylase, biotin carboxylase id=2940082 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
accC; acetyl-CoA carboxylase, biotin carboxylase component
GWB2_DPX2_65_81_gwb2_scaffold_505_26
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21605..22951
DNA (1347bp) protein (449aa)
TPR repeat-containing protein id=2213779 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_505_trna_1
unknown

Not on your lists

23009..23080
DNA (72bp)
transferRNA
GWB2_DPX2_65_81_gwb2_scaffold_505_27
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23216..27493
DNA (4278bp) protein (1426aa)
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Putative uncharacterized protein id=2213780 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
GWB2_DPX2_65_81_gwb2_scaffold_505_28
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27480..30251
DNA (2772bp) protein (924aa)
outer membrane protein, OMP85 family; K07277 outer membrane protein Tax=GWA2_Deltaproteobacteria_65_63_curated
Outer membrane protein, OMP85 family, putative id=2213781 bin=GWB2_Deltaproteobacteria_65_81 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
OMP85 family outer membrane protein
GWB2_DPX2_65_81_gwb2_scaffold_505_29
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30339..31763
DNA (1425bp) protein (475aa)
Sensor diguanylate cyclase, GAF domain-containing id=2213782 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
sensor diguanylate cyclase, GAF domain-containing Tax=GWA2_Deltaproteobacteria_65_63_curated
sensor diguanylate cyclase, GAF domain-containing
Displaying 30 items

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