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GWB2_Geobacter-like_52_12_gwb2_scaffold_526

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_1
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..189
-----------------
DNA (189bp)
protein (63aa)
Periplasmically oriented, membrane-bound formate dehydrogenase, cytochrome b subunit id=2219739 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
fdnI-1; formate dehydrogenase b-type cytochrome subunit Tax=GWB2_Geobacteraceae_52_12_curated
fdnI-1; formate dehydrogenase b-type cytochrome subunit
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_2
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298..960
-----------------
DNA (663bp)
protein (221aa)
Formate dehydrogenase family accessory protein FdhD id=2219740 bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
formate dehydrogenase subunit FdhD; K02379 FdhD protein Tax=GWB2_Geobacteraceae_52_12_curated
formate dehydrogenase accessory protein FdhD and molybdopterin nucleotidyltransferase
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_3
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1158..2762
-----------------
DNA (1605bp)
protein (535aa)
Methyl-accepting chemotaxis sensory transducer id=2219741 bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein Tax=GWB2_Geobacteraceae_52_12_curated
methyl-accepting chemotaxis sensory transducer
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_4
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2845..3972)
-----------------
DNA (1128bp)
protein (376aa)
hypothetical protein id=2219742 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4006..6102)
-----------------
DNA (2097bp)
protein (699aa)
Spore coat protein U id=2219743 bin=GWB2_Geobacter-like_52_12 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Di-heme cytochrome c peroxidase Tax=GWB2_Geobacteraceae_52_12_curated
Di-heme cytochrome c peroxidase
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_6
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6115..7425)
-----------------
DNA (1311bp)
protein (437aa)
Multicopper oxidase type 3 id=2219744 bin=GWB2_Geobacter-like_52_12 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
multicopper oxidase type 3 Tax=GWB2_Geobacteraceae_52_12_curated
multicopper oxidase type 3
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_7
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7465..8850)
-----------------
DNA (1386bp)
protein (462aa)
Putative signal peptide protein id=2219745 bin=GWB2_Geobacter-like_52_12 species=Erythrobacter sp. SD-21 genus=Erythrobacter taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
multicopper oxidase type 3 Tax=GWB2_Geobacteraceae_52_12_curated
multicopper oxidase type 3
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_8
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8892..9836)
-----------------
DNA (945bp)
protein (315aa)
hypothetical protein
Uncharacterized protein id=2219746 bin=GWB2_Geobacter-like_52_12 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Uncharacterized protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_9
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11260..12357)
-----------------
DNA (1098bp)
protein (366aa)
hypothetical protein id=2219747 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_10
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12371..14632)
-----------------
DNA (2262bp)
protein (754aa)
Uncharacterized protein id=2219748 bin=GWB2_Geobacter-like_52_12 species=Kordia algicida genus=Kordia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_11
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14987..16414)
-----------------
DNA (1428bp)
protein (476aa)
Sigma-54-dependent transcriptional response regulator id=2219749 bin=GWB2_Geobacter-like_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
sigma-54-dependent transcriptional response regulator Tax=GWB2_Geobacteraceae_52_12_curated
sigma-54-dependent transcriptional response regulator
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_12
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16401..18026)
-----------------
DNA (1626bp)
protein (542aa)
PAS domain-containing sensor histidine kinase Tax=GWB2_Geobacteraceae_52_12_curated
Sensor histidine kinase, PAS domain-containing id=2219750 bin=GWB2_Geobacter-like_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
sensor histidine kinase, PAS domain-containing
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_13
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18324..18650
-----------------
DNA (327bp)
protein (109aa)
Transposase of ISPca9, ISL3 family id=2219776 bin=GWB2_Geobacter-like_52_12 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Transposase of ISPca9, ISL3 family Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_14
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18665..19462
-----------------
DNA (798bp)
protein (266aa)
Methyltransferase type 11 id=2219777 bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
type 11 methyltransferase Tax=GWB2_Geobacteraceae_52_12_curated
type 11 methyltransferase
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_15
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19363..19662)
-----------------
DNA (300bp)
protein (100aa)
hypothetical protein id=2219778 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_16
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19679..21010)
-----------------
DNA (1332bp)
protein (444aa)
Uncharacterized protein id=2219779 bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_17
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21047..23323)
-----------------
DNA (2277bp)
protein (759aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWB2_Geobacteraceae_52_12_curated
Copper-transporting P-type ATPase id=2219780 bin=GWB2_Geobacter-like_52_12 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
heavy metal translocating P-type ATPase
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_18
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23369..23494)
-----------------
DNA (126bp)
protein (42aa)
Putative uncharacterized protein id=2219781 bin=GWB2_Geobacter-like_52_12 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
Putative uncharacterized protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_19
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23491..23679)
-----------------
DNA (189bp)
protein (63aa)
Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_20
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23769..23870
-----------------
DNA (102bp)
protein (34aa)
hypothetical protein id=2219782 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_21
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23833..24405)
-----------------
DNA (573bp)
protein (191aa)
Putative uncharacterized protein id=2219783 bin=GWB2_Geobacter-like_52_12 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_22
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24402..24944)
-----------------
DNA (543bp)
protein (181aa)
Putative uncharacterized protein id=2219784 bin=GWB2_Geobacter-like_52_12 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein; K07112 Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_23
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24950..26047)
-----------------
DNA (1098bp)
protein (366aa)
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] Tax=GWB2_Geobacteraceae_52_12_curated
Rhodanese domain protein id=2219785 bin=GWB2_Geobacter-like_52_12 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
rhodanese domain-containing protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_24
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26116..26790)
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
Putative uncharacterized protein id=2219786 bin=GWB2_Geobacter-like_52_12 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_25
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26824..27210)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein id=2219787 bin=GWB2_Geobacter-like_52_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_26
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27277..27855)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein id=2219788 bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_27
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27968..30772)
-----------------
DNA (2805bp)
protein (935aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=GWB2_Geobacteraceae_52_12_curated
Aconitate hydratase 1 id=2219789 bin=GWB2_Geobacter-like_52_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
acnA; aconitate hydratase
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_28
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30964..32115)
-----------------
DNA (1152bp)
protein (384aa)
cytochrome P450; K00517 [EC:1.14.-.-] Tax=GWB2_Geobacteraceae_52_12_curated
Cytochrome P450 id=2219790 bin=GWB2_Geobacter-like_52_12 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
cytochrome P450
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_29
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32139..32333)
-----------------
DNA (195bp)
protein (65aa)
Ferredoxin family protein, putative id=2219791 bin=GWB2_Geobacter-like_52_12 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
ferredoxin; K05337 ferredoxin Tax=GWB2_Geobacteraceae_52_12_curated
ferredoxin
GWB2_Geobacter-like_52_12_gwb2_scaffold_526_30
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32500..33105)
-----------------
DNA (606bp)
protein (202aa)
Putative uncharacterized protein id=2219792 bin=GWB2_Geobacter-like_52_12 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein Tax=GWB2_Geobacteraceae_52_12_curated
hypothetical protein
Displaying items 1-30 of 49 in total

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