ggKbase home page

GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_1
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

2..883
DNA (882bp) protein (294aa)
Metal ion efflux pump, RND family, outer membrane protein id=1742674 bin=GWB2_Nitrospirae_rel_47_37 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RND family metal ion efflux pump outer membrane protein Tax=GWB2_Nitrospirae_47_37_curated
RND family metal ion efflux pump outer membrane protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

880..2121
DNA (1242bp) protein (414aa)
Efflux transporter, RND family, MFP subunit id=1742675 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_3
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

2126..5314
DNA (3189bp) protein (1063aa)
silA; cation efflux system protein silA Tax=GWB2_Nitrospirae_47_37_curated
Putative cation efflux system protein silA id=1742676 bin=GWB2_Nitrospirae_rel_47_37 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
silA; cation efflux system protein silA
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

5319..5612
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=1742677 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_5
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(5620..6891)
DNA (1272bp) protein (424aa)
Metal dependent phosphohydrolase id=1742679 bin=GWB2_Nitrospirae_rel_47_37 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
metal dependent phosphohydrolase Tax=GWB2_Nitrospirae_47_37_curated
metal dependent phosphohydrolase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(6929..7756)
DNA (828bp) protein (276aa)
Putative uncharacterized protein id=1742681 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_7
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(7963..8109)
DNA (147bp) protein (49aa)
Nucleotidyltransferase id=1742731 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Nucleotidyltransferase Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_8
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(8106..8399)
DNA (294bp) protein (98aa)
Uncharacterized protein id=1742732 bin=GWB2_Nitrospirae_rel_47_37 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
DNA polymerase beta domain-containing protein; K07075 Tax=GWB2_Nitrospirae_47_37_curated
DNA polymerase beta domain-containing protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_9
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(8430..11780)
DNA (3351bp) protein (1117aa)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
Putative uncharacterized protein id=1742734 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_10
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(11853..13298)
DNA (1446bp) protein (482aa)
Divergent AAA region id=1742738 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ATP-dependent DNA helicase Tax=GWB2_Nitrospirae_47_37_curated
ATP-dependent DNA helicase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_11
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(13302..16496)
DNA (3195bp) protein (1065aa)
helicase domain-containing protein Tax=GWB2_Nitrospirae_47_37_curated
Helicase domain protein id=1742740 bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
helicase domain-containing protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_12
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(16530..17027)
DNA (498bp) protein (166aa)
UPF0234 protein LW3_0090 id=1742742 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein; K09767 hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_13
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(17042..17476)
DNA (435bp) protein (145aa)
Uncharacterized protein id=1742744 bin=GWB2_Nitrospirae_rel_47_37 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_14
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

17584..19341
DNA (1758bp) protein (586aa)
integral membrane sensor signal transduction histidine kinase Tax=GWB2_Nitrospirae_47_37_curated
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like id=1742746 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
integral membrane sensor signal transduction histidine kinase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_15
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

19346..20029
DNA (684bp) protein (228aa)
Two component transcriptional regulator, winged helix family id=1742748 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=GWB2_Nitrospirae_47_37_curated
two component transcriptional regulator, winged helix family
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_16
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

20038..20979
DNA (942bp) protein (314aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein id=1742750 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein Tax=GWB2_Nitrospirae_47_37_curated
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_17
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

20979..22403
DNA (1425bp) protein (475aa)
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A-like id=1742754 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Signal transduction histidine kinase Tax=GWB2_Nitrospirae_47_37_curated
Signal transduction histidine kinase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_18
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

22400..23785
DNA (1386bp) protein (462aa)
NtrC family two-component system response regulator id=1742757 bin=GWB2_Nitrospirae_rel_47_37 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
NtrC family two-component system response regulator Tax=GWB2_Nitrospirae_47_37_curated
NtrC family two-component system response regulator
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_19
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

23923..24588
DNA (666bp) protein (222aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein id=1742760 bin=GWB2_Nitrospirae_rel_47_37 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
4Fe-4S ferredoxin Tax=GWB2_Nitrospirae_47_37_curated
4Fe-4S ferredoxin
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_20
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

24600..27446
DNA (2847bp) protein (949aa)
anaerobic dehydrogenase Tax=GWB2_Nitrospirae_47_37_curated
Twin-arginine translocation pathway signal id=1742762 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
anaerobic dehydrogenase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_21
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

27519..28160
DNA (642bp) protein (214aa)
Cytoplasmic chaperone TorD id=1742764 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cytoplasmic chaperone TorD family protein Tax=GWB2_Nitrospirae_47_37_curated
cytoplasmic chaperone TorD family protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_22
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(28157..28390)
DNA (234bp) protein (78aa)
Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_23
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(28406..28675)
DNA (270bp) protein (90aa)
Putative uncharacterized protein id=1742766 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_1292_24
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(28677..29552)
DNA (876bp) protein (292aa)
Polyferredoxin id=1742768 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
polyferredoxin; K02574 ferredoxin-type protein NapH Tax=GWB2_Nitrospirae_47_37_curated
polyferredoxin
Displaying 24 items

View Taxonomy