ggKbase home page

GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518

Search features with annotation key words

Displaying items 1-30 of 62 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_1
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(153..1262)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein id=2217406 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_2
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(1269..2495)
DNA (1227bp) protein (409aa)
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1) Tax=GWB2_Nitrospirae_47_37_curated
glyA1; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2217432 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_3
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(2456..3418)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein id=2217433 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein Tax=GWB2_Nitrospirae_47_37_curated
NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(3415..4713)
DNA (1299bp) protein (433aa)
Membrane-bound serine protease id=2217434 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) Tax=GWB2_Nitrospirae_47_37_curated
membrane-bound serine protease rbh
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_5
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(4736..5614)
DNA (879bp) protein (293aa)
Putative uncharacterized protein id=2217435 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_6
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

6110..7126
DNA (1017bp) protein (339aa)
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=GWB2_Nitrospirae_47_37_curated
ilvC; Ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase id=2217436 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_7
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(7191..7451)
DNA (261bp) protein (87aa)
Helix-turn-helix protein, CopG family id=2217437 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
CopG family transcriptional regulator Tax=GWB2_Nitrospirae_47_37_curated
CopG family transcriptional regulator
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_8
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(7429..7701)
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=2217438 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein; K09803 hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_9
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

7795..8424
DNA (630bp) protein (210aa)
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWB2_Nitrospirae_47_37_curated
Phosphatidylserine decarboxylase proenzyme id=2217439 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphatidylserine decarboxylase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_10
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(8421..9140)
DNA (720bp) protein (240aa)
Outer membrane transport energization protein TonB id=2217440 bin=GWB2_Nitrospirae_rel_47_37 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
TonB family protein; K03832 periplasmic protein TonB Tax=GWB2_Nitrospirae_47_37_curated
TonB family protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_11
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(9127..9324)
DNA (198bp) protein (66aa)
hypothetical protein id=2217441 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_12
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(9311..10132)
DNA (822bp) protein (274aa)
4Fe-4S binding domain protein id=2217442 bin=GWB2_Nitrospirae_rel_47_37 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
4Fe-4S ferredoxin Tax=GWB2_Nitrospirae_47_37_curated
4Fe-4S ferredoxin
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_13
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(10116..10571)
DNA (456bp) protein (152aa)
hypothetical protein id=2217443 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_14
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(10571..12667)
DNA (2097bp) protein (699aa)
TonB-dependent receptor Tax=GWB2_Nitrospirae_47_37_curated
TonB-dependent receptor id=2217444 bin=GWB2_Nitrospirae_rel_47_37 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
TonB-dependent receptor
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_15
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(12809..13099)
DNA (291bp) protein (97aa)
hypothetical protein id=2217445 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_16
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(13178..13846)
DNA (669bp) protein (223aa)
ABC transporter related id=2217446 bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ABC transporter related protein; K02003 putative ABC transport system ATP-binding protein Tax=GWB2_Nitrospirae_47_37_curated
ABC transporter related protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_17
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(13851..15047)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein id=2217447 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ABC transporter permease protein Tax=GWB2_Nitrospirae_47_37_curated
ABC transporter permease
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_18
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(15149..16195)
DNA (1047bp) protein (349aa)
hypothetical protein id=2217448 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_19
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(16455..17822)
DNA (1368bp) protein (456aa)
Response regulator id=2217449 bin=GWB2_Nitrospirae_rel_47_37 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Response regulator Tax=GWB2_Nitrospirae_47_37_curated
response regulator
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_20
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(17815..19518)
DNA (1704bp) protein (568aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=GWB2_Nitrospirae_47_37_curated
Histidine kinase id=2217450 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
histidine kinase
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_21
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(19515..20312)
DNA (798bp) protein (266aa)
ABC-type phosphate transport system periplasmic component-like protein id=2217451 bin=GWB2_Nitrospirae_rel_47_37 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
phosphate ABC transporter substrate-binding protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_22
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

20336..21118
DNA (783bp) protein (261aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=GWB2_Nitrospirae_47_37_curated
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase id=2217452 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_23
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

21120..22622
DNA (1503bp) protein (501aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=GWB2_Nitrospirae_47_37_curated
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase id=2217453 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_24
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(22646..22858)
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=2217454 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_25
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(22855..23304)
DNA (450bp) protein (150aa)
Uncharacterized protein id=2217455 bin=GWB2_Nitrospirae_rel_47_37 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
putative nucleic acid-binding protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_26
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(23495..25594)
DNA (2100bp) protein (700aa)
hemagglutinin-related protein Tax=GWB2_Nitrospirae_47_37_curated
Putative hemagglutinin-related protein id=2217465 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hemagglutinin-like protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_27
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(25591..26058)
DNA (468bp) protein (156aa)
Uncharacterized protein (Fragment) id=2217467 bin=GWB2_Nitrospirae_rel_47_37 species=[Clostridium] hiranonis genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Uncharacterized protein (Fragment) Tax=GWB2_Nitrospirae_47_37_curated
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_28
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

26206..27240
DNA (1035bp) protein (345aa)
Putative uncharacterized protein id=2217469 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfotomaculum acetoxidans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein Tax=GWB2_Nitrospirae_47_37_curated
hypothetical protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_29
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(27233..29776)
DNA (2544bp) protein (848aa)
hypothetical protein id=2217471 bin=GWB2_Nitrospirae_rel_47_37 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
dynamin family protein Tax=GWB2_Nitrospirae_47_37_curated
dynamin family protein
GWB2_Nitrospirae_rel_47_37_gwb2_scaffold_518_30
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

30019..31278
DNA (1260bp) protein (420aa)
leuC; 3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=GWB2_Nitrospirae_47_37_curated
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=2217473 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Displaying items 1-30 of 62 in total

View Taxonomy