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gwc1_scaffold_559

Alias: GWC1_OD1_38_22_7

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_559_1
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(55..330)
DNA (276bp) protein (92aa)
Tax=GWC1_OD1_38_22
gwc1_scaffold_559_2
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(357..830)
DNA (474bp) protein (158aa)
seg 141..156 Tax=GWC1_OD1_38_22
seg 141..156 alias=ACD8_C00021G00018,ACD8_9917.17435.19G0018,ACD8_9917.17435.19_18 id=137014 tax=ACD8 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_3

Not on your lists

comp(832..2094)
DNA (1263bp) protein (421aa)
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:EKE11973.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
nickel-dependent hydrogenase large subunit alias=ACDUNK_660.87465.91G0004,ACDUNK_660.87465.91_4,ACD1_C00055G00004 id=17318 tax=ACD1 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_4
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(2141..2521)
DNA (381bp) protein (127aa)
S23 ribosomal protein {ECO:0000313|EMBL:KKQ62756.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
hypothetical protein
S23 ribosomal protein alias=ACD56_C00023G00005,ACD56_75634.15978.14G0005,ACD56_75634.15978.14_5 id=84198 tax=ACD56 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_5
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2544..3422)
DNA (879bp) protein (293aa)
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:KKQ46068.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit
gwc1_scaffold_559_6
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(3482..4189)
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ62758.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
gwc1_scaffold_559_7
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(4191..4403)
DNA (213bp) protein (71aa)
Hydrogenase expression/formation protein Tax=GWC1_OD1_38_22
Hydrogenase expression/formation protein
gwc1_scaffold_559_8
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(4502..5425)
DNA (924bp) protein (308aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.40); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=GWC1_OD1_38_22
fba; fructose-bisphosphate aldolase Fba (EC:4.1.2.13)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.40); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] alias=ACDUNK_660.87465.91G0013,ACDUNK_660.87465.91_13,ACD1_C00055G00013 id=17312 tax=ACD1 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_9
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(5547..6311)
DNA (765bp) protein (255aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=GWC1_OD1_38_22
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] alias=ACD5_96580.5470.9G0003,ACD5_96580.5470.9_3,ACD5_C00043G00003 id=88461 tax=ACD5 species=Lactobacillus delbrueckii genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
triosephosphate isomerase
gwc1_scaffold_559_10
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(6318..6797)
DNA (480bp) protein (160aa)
putative small multi-drug export protein Tax=GWC1_OD1_38_22
putative small multi-drug export protein
putative small multi-drug export protein alias=ACDUNK_660.87465.91G0015,ACDUNK_660.87465.91_15,ACD1_C00055G00015 id=17313 tax=ACD1 species=Methanosarcina barkeri genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_11
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(6825..7043)
DNA (219bp) protein (73aa)
Tax=GWC1_OD1_38_22
gwc1_scaffold_559_12
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(7071..8117)
DNA (1047bp) protein (349aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=GWC1_OD1_38_22
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] alias=ACD5_96580.5470.9G0005,ACD5_96580.5470.9_5,ACD5_C00043G00005 id=88465 tax=ACD5 species=unknown genus=unknown taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=OD1-i organism_desc=OD1-i
galactose-1-phosphate uridylyltransferase
gwc1_scaffold_559_13
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8169..8933)
DNA (765bp) protein (255aa)
Glycosyl transferase family protein {ECO:0000313|EMBL:KKQ46060.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
glycosyltransferase
glycosyl transferase family protein alias=ACD5_96580.5470.9_6,ACD5_96580.5470.9G0006,ACD5_C00043G00006 id=88458 tax=ACD5 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_14
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(9131..9565)
DNA (435bp) protein (145aa)
putative Holliday junction resolvase (EC:3.1.-.-)
Uncharacterized protein {ECO:0000313|EMBL:KKQ62766.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
gwc1_scaffold_559_15
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

9624..9869
DNA (246bp) protein (82aa)
Tax=GWC1_OD1_38_22
gwc1_scaffold_559_16
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10294..11058)
DNA (765bp) protein (255aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] alias=ACDUNK_2911.20226.18G0005,ACDUNK_2911.20226.18_5,ACD8_C00051G00005 id=137366 tax=ACD8 species=unknown genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1-i organism_desc=OD1-i
Methionine aminopeptidase {ECO:0000313|EMBL:KKQ46057.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
gwc1_scaffold_559_17
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11108..11755)
DNA (648bp) protein (216aa)
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] alias=ACD5_7884.4885.8G0002,ACD5_7884.4885.8_2,ACD5_C00148G00002 id=89103 tax=ACD5 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Adenylate kinase {ECO:0000313|EMBL:KKQ46056.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
adenylate kinase
gwc1_scaffold_559_18
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(11892..13163)
DNA (1272bp) protein (424aa)
Preprotein translocase, SecY subunit, preprotein translocase subunit SecY {ECO:0000313|EMBL:KKQ62770.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_3
preprotein translocase subunit SecY
sti:Sthe_1056 preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY alias=ACD5_C00148G00003,ACD5_7884.4885.8G0003,ACD5_7884.4885.8_3 id=89109 tax=ACD5 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_19
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(13266..13703)
DNA (438bp) protein (146aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=GWC1_OD1_38_22
rplO; 50S ribosomal protein L15
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 alias=ACD5_7884.4885.8G0004,ACD5_7884.4885.8_4,ACD5_C00148G00004 id=89104 tax=ACD5 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_20
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(13805..14335)
DNA (531bp) protein (177aa)
30S ribosomal protein S5, small subunit ribosomal protein S5 {ECO:0000313|EMBL:KKQ62772.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
rpsE; 30S ribosomal protein S5
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 alias=ACD5_7884.4885.8G0005,ACD5_7884.4885.8_5,ACD5_C00148G00005 id=89105 tax=ACD5 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_21
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(14431..14781)
DNA (351bp) protein (117aa)
ribosomal protein L18 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C3775F alias=ACD5_C00148G00006,ACD5_7884.4885.8G0006,ACD5_7884.4885.8_6 id=89108 tax=ACD5 species=Ruminococcus flavefaciens genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Ribosomal protein L18 {ECO:0000313|EMBL:KKQ62773.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
50S ribosomal protein L18
gwc1_scaffold_559_22
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(14852..15388)
DNA (537bp) protein (179aa)
Ribosomal protein L6, large subunit ribosomal protein L6 {ECO:0000313|EMBL:KKQ62774.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
50S ribosomal protein L6
ribosomal protein L6; K02933 large subunit ribosomal protein L6 alias=ACD5_7884.4885.8G0007,ACD5_7884.4885.8_7,ACD5_C00148G00007 id=89106 tax=ACD5 species=Streptobacillus moniliformis genus=Streptobacillus taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_23
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(15487..15891)
DNA (405bp) protein (135aa)
30S ribosomal protein S8 {ECO:0000313|EMBL:KKQ46050.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
30S ribosomal protein S8
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 alias=ACDUNK_2911.20226.18G0016,ACDUNK_2911.20226.18_16,ACD8_C00051G00016 id=137361 tax=ACD8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_24
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(16232..16780)
DNA (549bp) protein (183aa)
50S ribosomal protein L5, large subunit ribosomal protein L5 {ECO:0000313|EMBL:KKQ62776.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
rplE; 50S ribosomal protein L5
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 alias=ACD5_27214.7648.15G0015,ACD5_27214.7648.15_15,ACD56_C00062G00015 id=84611 tax=ACD56 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_25
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(16873..17178)
DNA (306bp) protein (102aa)
50S ribosomal protein L24 {ECO:0000313|EMBL:KKQ46048.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
50S ribosomal protein L24
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 alias=ACD5_27214.7648.15G0014,ACD5_27214.7648.15_14,ACD56_C00062G00014 id=84610 tax=ACD56 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_26

Not on your lists


comp(17285..17650)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rplN; 50S ribosomal protein L14
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 alias=ACD5_27214.7648.15G0013,ACD5_27214.7648.15_13,ACD56_C00062G00013 id=84609 tax=ACD56 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_27
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(17751..17993)
DNA (243bp) protein (81aa)
30S ribosomal protein S17 {ECO:0000313|EMBL:KKQ46046.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
30S ribosomal protein S17
30S 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 alias=ACD5_27214.7648.15G0012,ACD5_27214.7648.15_12,ACD56_C00062G00012 id=84608 tax=ACD56 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_28
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(18088..18282)
DNA (195bp) protein (65aa)
coiled-coil 11..32 Tax=GWC1_OD1_38_22
coiled-coil 11..32 alias=ACD5_27214.7648.15G0011,ACD5_27214.7648.15_11,ACD56_C00062G00011 id=84606 tax=ACD56 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_29
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(18301..18711)
DNA (411bp) protein (137aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKQ81273.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
50S ribosomal protein L16
LSU ribosomal protein L16P; K02878 large subunit ribosomal protein L16 alias=ACD5_C00050G00006,ACD5_26962.4750.9G0006,ACD5_26962.4750.9_6 id=88521 tax=ACD5 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
gwc1_scaffold_559_30
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(18818..19468)
DNA (651bp) protein (217aa)
ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=GWC1_OD1_38_22
30S ribosomal protein S3
ribosomal protein S3; K02982 small subunit ribosomal protein S3 alias=ACD5_27214.7648.15G0009,ACD5_27214.7648.15_9,ACD56_C00062G00009 id=84619 tax=ACD56 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Displaying items 1-30 of 46 in total

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