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gwc1_scaffold_7857

Alias: GWC1_WWE3_42_102_28

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_7857_1
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


1..213
DNA (213bp) protein (71aa)
50S ribosomal protein L17 {ECO:0000313|EMBL:KKS03483.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
rplQ; 50S ribosomal protein L17
coiled-coil 49..70 alias=ACD37_C00160G00001,ACD37_63129.2225.8G0001,ACD37_63129.2225.8_1 id=41991 tax=ACD37 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7857_2
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists


203..625
DNA (423bp) protein (141aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
rplM; 50S ribosomal protein L13
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 alias=ACD37_C00160G00002,ACD37_63129.2225.8G0002,ACD37_63129.2225.8_2 id=41992 tax=ACD37 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7857_3
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists


628..1062
DNA (435bp) protein (145aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS03485.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 alias=ACD37_C00160G00003,ACD37_63129.2225.8G0003,ACD37_63129.2225.8_3 id=41993 tax=ACD37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7857_4
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(1059..1334)
DNA (276bp) protein (92aa)
lambda repressor-like DNA-binding domains 1..66 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
lambda repressor-like DNA-binding domains 1..66 alias=ACD37_C00160G00004,ACD37_63129.2225.8G0004,ACD37_63129.2225.8_4 id=41990 tax=ACD37 species=OP11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OP11 organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7857_5

Not on your lists

1397..2086
DNA (690bp) protein (230aa)
DNA repair protein RadC {ECO:0000313|EMBL:EKD85827.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
radC; DNA repair protein RadC
radC; DNA repair protein RadC; K03630 DNA repair protein RadC alias=ACD37_C00160G00005,ACD37_63129.2225.8G0005,ACD37_63129.2225.8_5 id=41989 tax=ACD37 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_7857_6
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

2083..2670
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03488.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_7857_7
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

2694..3134
DNA (441bp) protein (147aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
Signal sequence peptidase
gwc1_scaffold_7857_8
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

3147..5711
DNA (2565bp) protein (855aa)
CLPC2; chaperone, Hsp100 family, ClpC-type; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
ota:Ot07g02080 AAA ATPase, central region:Clp, N terminal:C (ISS); K03696 ATP-dependent Clp protease ATP-binding subunit ClpC alias=RAAC2_WWE3_C00001G00033,RAAC2_WWE3_33 id=725080 tax=RAAC2_WWE3 species=unknown genus=Ianmoorea taxon_order=Coleoptera taxon_class=Insecta phylum=Arthropoda organism_group=WWE3
gwc1_scaffold_7857_9
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

5740..6228
DNA (489bp) protein (163aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
aae:aq_1840 prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 alias=RAAC2_WWE3_C00001G00032,RAAC2_WWE3_32 id=725079 tax=RAAC2_WWE3 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=WWE3
gwc1_scaffold_7857_10
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

6225..6689
DNA (465bp) protein (155aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
aae:aq_1840 prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 alias=RAAC2_WWE3_C00001G00032,RAAC2_WWE3_32 id=725079 tax=RAAC2_WWE3 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae organism_group=WWE3
gwc1_scaffold_7857_11
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(6690..6944)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS03492.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_7857_12
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(6967..9219)
DNA (2253bp) protein (751aa)
FtsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
pth:PTH_1293 FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family alias=RAAC2_WWE3_C00001G00030,RAAC2_WWE3_30 id=725077 tax=RAAC2_WWE3 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=WWE3
gwc1_scaffold_7857_13
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(9303..10637)
DNA (1335bp) protein (445aa)
ccl:Clocl_2287 hypothetical protein; K12574 ribonuclease J [EC:3.1.-.-] alias=RAAC2_WWE3_C00001G00029,RAAC2_WWE3_29 id=725076 tax=RAAC2_WWE3 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=WWE3
hypothetical protein Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwc1_scaffold_7857_14
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(10741..10890)
DNA (150bp) protein (50aa)
Metallo-beta-lactamase {ECO:0000313|EMBL:KKS03494.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_7857_15
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(10900..11529)
DNA (630bp) protein (210aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] alias=RAAC2_WWE3_C00001G00028,RAAC2_WWE3_28 id=725075 tax=RAAC2_WWE3 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=WWE3
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:KKS03495.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_7857_16
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(11531..12604)
DNA (1074bp) protein (358aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] alias=RAAC2_WWE3_C00001G00027,RAAC2_WWE3_27 id=725074 tax=RAAC2_WWE3 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3
Lon protease {ECO:0000313|EMBL:KKS03496.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
gwc1_scaffold_7857_17
RIFOXYC1_FULL_WWE3_42_17_curated, WWE3, Bacteria

Not on your lists

comp(12597..13520)
DNA (924bp) protein (308aa)
transmembrane_regions 55..77 Tax=RIFOXYC1_FULL_WWE3_42_17_curated
hypothetical protein
gwc1_scaffold_7857_18
GWC2_WWE3_41_23, WWE3, Bacteria

Not on your lists

comp(13564..14382)
DNA (819bp) protein (273aa)
mas:Mahau_1041 polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=RAAC2_WWE3_C00001G00025,RAAC2_WWE3_25 id=725072 tax=RAAC2_WWE3 species=Veillonella sp. oral taxon 780 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=WWE3
Polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKS03498.1}; TaxID=1619123 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWC2_41_23.;"
hypothetical protein
Displaying 18 items

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