ggKbase home page

gwc1_scaffold_5169

Alias: GWC1_CP_49_13_partial_14

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwc1_scaffold_5169_1
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

1..1038
DNA (1038bp) protein (346aa)
Tax=GWC1_CPR1_49_13
gwc1_scaffold_5169_2
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

1089..2102
DNA (1014bp) protein (338aa)
Type IV pilus assembly protein PilM n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSX7_9BACT alias=ACD38_16809.48115.11G0019,ACD38_16809.48115.11_19,ACD38_C00005G00019 id=43028 tax=ACD38 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
Type IV pilus assembly protein PilM Tax=GWC1_CPR1_49_13
hypothetical protein
gwc1_scaffold_5169_3
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

2103..2699
DNA (597bp) protein (199aa)
hypothetical protein
Tax=GWC1_CPR1_49_13
gwc1_scaffold_5169_4
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

2699..3361
DNA (663bp) protein (221aa)
hypothetical protein
Tax=GWC1_CPR1_49_13
gwc1_scaffold_5169_5
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists


3407..3787
DNA (381bp) protein (127aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=GWC1_CPR1_49_13
hypothetical protein
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 alias=RAAC2_WWE3_432,RAAC2_WWE3_C00001G00432 id=725479 tax=RAAC2_WWE3 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3
gwc1_scaffold_5169_6
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

3784..4020
DNA (237bp) protein (79aa)
hypothetical protein; K06960 Tax=GWC1_CPR1_49_13
hypothetical protein
hypothetical protein; K06960 alias=scaffold_5_86,RBG2_C00005G00086 id=1241942 tax=RBG2 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
gwc1_scaffold_5169_7
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(4026..4709)
DNA (684bp) protein (228aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine-N1-)-methyltransferase [EC:2.1.1.31] Tax=GWC1_CPR1_49_13
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine-N1-)-methyltransferase [EC:2.1.1.31] alias=ACD38_16809.48115.11G0022,ACD38_16809.48115.11_22,ACD38_C00005G00022 id=43029 tax=ACD38 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
tRNA (guanine-N1)-methyltransferase
gwc1_scaffold_5169_8
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(4706..5410)
DNA (705bp) protein (235aa)
Ribonuclease III n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R1Z7_9FIRM alias=ACD22_C00103G00001,ACD22_15834.2384.18_1,ACD22_15834.2384.18G0001 id=23569 tax=ACD22 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3
Ribonuclease III Tax=GWC1_CPR1_49_13
hypothetical protein
gwc1_scaffold_5169_9
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(5391..5867)
DNA (477bp) protein (159aa)
NusB antitermination factor; K03625 N utilization substance protein B Tax=GWC1_CPR1_49_13
hypothetical protein
NusB antitermination factor; K03625 N utilization substance protein B alias=ACD24_C00028G00003,ACD24_7808.7081.18G0003,ACD24_7808.7081.18_3 id=27662 tax=ACD24 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3
gwc1_scaffold_5169_10
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

5933..6067
DNA (135bp) protein (45aa)
Tax=GWC1_CPR1_49_13
gwc1_scaffold_5169_11
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(6133..6669)
DNA (537bp) protein (179aa)
Methyltransferase small Tax=GWC1_CPR1_49_13
methyltransferase small
Methyltransferase small
gwc1_scaffold_5169_12
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(6729..8090)
DNA (1362bp) protein (454aa)
dev:DhcVS_1051 recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] Tax=GWC1_CPR1_49_13
dev:DhcVS_1051 recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] alias=ACD50_23800.8309.9G0003,ACD50_23800.8309.9_3,ACD50_C00047G00003 id=71771 tax=ACD50 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
hypothetical protein
gwc1_scaffold_5169_13
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(8129..8674)
DNA (546bp) protein (182aa)
ttr:Tter_1650 ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] Tax=GWC1_CPR1_49_13
ttr:Tter_1650 ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] alias=ACD24_C00028G00007,ACD24_7808.7081.18G0007,ACD24_7808.7081.18_7 id=27661 tax=ACD24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=WWE3 organism_desc=WWE3
hypothetical protein
gwc1_scaffold_5169_14
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

comp(8700..9863)
DNA (1164bp) protein (388aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase Tax=GWC1_CPR1_49_13
Tyrosine--tRNA ligase
gwc1_scaffold_5169_15
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists

10001..12751
DNA (2751bp) protein (917aa)
1A family penicillin-binding protein Tax=GWC1_CPR1_49_13
hypothetical protein
1A family penicillin-binding protein alias=ACD13_C00002G00021,ACD13_47017.65743.18G0021,ACD13_47017.65743.18_21 id=6082 tax=ACD13 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OP11 organism_desc=OP11
gwc1_scaffold_5169_16
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists


comp(12748..14655)
DNA (1908bp) protein (636aa)
pheT; phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=GWC1_CPR1_49_13
phenylalanine--tRNA ligase (EC:6.1.1.20)
pheT; phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] alias=ACD38_16738.21107.11G0001,ACD38_16738.21107.11_1,ACD38_C00006G00001 id=43068 tax=ACD38 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
gwc1_scaffold_5169_17
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists


comp(14657..15670)
DNA (1014bp) protein (338aa)
Phenylalanyl-tRNA synthetase, alpha subunit, phenylalanyl-tRNA synthetase alpha chain {ECO:0000313|EMBL:KKW05571.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KKW05571.1};; TaxID=1618342 species="Bacteria; candid
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
phenylalanyl-tRNA synthetase, alpha subunit; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] alias=ACD38_16738.21107.11G0002,ACD38_16738.21107.11_2,ACD38_C00006G00002 id=43069 tax=ACD38 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
gwc1_scaffold_5169_18
GWC1_CPR1_49_13, CPR1, Bacteria

Not on your lists


comp(15667..15933)
DNA (267bp) protein (89aa)
50S ribosomal protein L20 n=2 Tax=Clostridiales RepID=A7VXH6_9CLOT alias=ACD12_83166.11978.12G0012,ACD12_83166.11978.12_12,ACD12_C00131G00012 id=4659 tax=ACD12 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=
50S ribosomal protein L20 Tax=GWC1_CPR1_49_13
50S ribosomal protein L20
Displaying 18 items

View Taxonomy