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GWC2_DPX2_66_88_gwc2_scaffold_3050

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX2_66_88_gwc2_scaffold_3050_1
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..102
DNA (102bp) protein (34aa)
Cell divisionFtsK/SpoIIIE id=2308446 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
FtsK-like cell division protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
GWC2_DPX2_66_88_gwc2_scaffold_3050_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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171..899
DNA (729bp) protein (243aa)
Outer-membrane lipoprotein carrier protein id=4272292 bin=GWC2_Deltaproteobacteria_66_88 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
outer membrane lipoprotein carrier protein LolA; K03634 outer membrane lipoprotein carrier protein Tax=GWA2_Deltaproteobacteria_65_63_curated
outer membrane lipoprotein carrier protein LolA
GWC2_DPX2_66_88_gwc2_scaffold_3050_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

896..2302
DNA (1407bp) protein (469aa)
rimO; 30S ribosomal protein S12 methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
Ribosomal protein S12 methylthiotransferase RimO id=2308448 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rimO; 30S ribosomal protein S12 methylthiotransferase
GWC2_DPX2_66_88_gwc2_scaffold_3050_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2366..2764
DNA (399bp) protein (133aa)
Zinc finger transcriptional regulator, TraR/DksA family id=4604269 bin=GWA2_Deltaproteo_65_63 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
dnaK suppressor protein; K06204 DnaK suppressor protein Tax=GWA2_Deltaproteobacteria_65_63_curated
TraR/DksA family zinc finger transcriptional regulator
GWC2_DPX2_66_88_gwc2_scaffold_3050_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2777..3817)
DNA (1041bp) protein (347aa)
Aminodeoxychorismate lyase id=2308450 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
aminodeoxychorismate lyase Tax=GWA2_Deltaproteobacteria_65_63_curated
aminodeoxychorismate lyase
GWC2_DPX2_66_88_gwc2_scaffold_3050_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3814..4251)
DNA (438bp) protein (146aa)
hypothetical protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
Putative Holliday junction resolvase id=2308451 bin=GWB2_Deltaproteobacteria_65_81 species=Coprococcus comes genus=Coprococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_3050_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4404..4982
DNA (579bp) protein (193aa)
PBS lyase HEAT domain protein repeat-containing protein id=2308452 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
HEAT repeat-containing PBS lyase Tax=GWA2_Deltaproteobacteria_65_63_curated
HEAT repeat-containing PBS lyase
GWC2_DPX2_66_88_gwc2_scaffold_3050_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4987..6372)
DNA (1386bp) protein (462aa)
Metal dependent phosphohydrolase id=4604372 bin=GWA2_Deltaproteo_65_63 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
metal dependent phosphohydrolase Tax=GWA2_Deltaproteobacteria_65_63_curated
metal dependent phosphohydrolase
GWC2_DPX2_66_88_gwc2_scaffold_3050_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6389..7966)
DNA (1578bp) protein (526aa)
PBS lyase HEAT domain protein repeat-containing protein id=2308454 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
HEAT repeat-containing PBS lyase Tax=GWA2_Deltaproteobacteria_65_63_curated
HEAT repeat-containing PBS lyase
GWC2_DPX2_66_88_gwc2_scaffold_3050_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8114..8506
DNA (393bp) protein (131aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=GWA2_Deltaproteobacteria_65_63_curated
Phosphatidylglycerophosphatase A id=4604377 bin=GWA2_Deltaproteo_65_63 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
phosphatidylglycerophosphatase A
GWC2_DPX2_66_88_gwc2_scaffold_3050_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8491..9000
DNA (510bp) protein (170aa)
competence/damage inducible protein CinA; K03743 Tax=GWA2_Deltaproteobacteria_65_63_curated
Competence/damage-inducible protein CinA domain protein id=2308456 bin=GWB2_Deltaproteobacteria_65_81 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
competence/damage inducible protein CinA
GWC2_DPX2_66_88_gwc2_scaffold_3050_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8997..9590
DNA (594bp) protein (198aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=GWA2_Deltaproteobacteria_65_63_curated
2'-5' RNA ligase id=2308457 bin=GWB2_Deltaproteobacteria_65_81 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
2'-5' RNA ligase
GWC2_DPX2_66_88_gwc2_scaffold_3050_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9590..10618
DNA (1029bp) protein (343aa)
Protein RecA id=4604385 bin=GWA2_Deltaproteo_65_63 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
recA protein; K03553 recombination protein RecA Tax=GWA2_Deltaproteobacteria_65_63_curated
recA protein
GWC2_DPX2_66_88_gwc2_scaffold_3050_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..11750
DNA (1128bp) protein (376aa)
Twitching motility protein id=2308459 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
twitching motility protein; K02669 twitching motility protein PilT Tax=GWA2_Deltaproteobacteria_65_63_curated
twitching motility protein
GWC2_DPX2_66_88_gwc2_scaffold_3050_15
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11782..12240
DNA (459bp) protein (153aa)
Regulatory protein RecX id=2308485 bin=GWB2_Deltaproteobacteria_65_81 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_3050_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12241..14874
DNA (2634bp) protein (878aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=GWA2_Deltaproteobacteria_65_63_curated
Alanine--tRNA ligase id=2308486 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
alanyl-tRNA synthetase
GWC2_DPX2_66_88_gwc2_scaffold_3050_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14905..15621)
DNA (717bp) protein (239aa)
TPR repeat-containing protein id=4272322 bin=GWC2_Deltaproteobacteria_66_88 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_3050_18
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15618..16337)
DNA (720bp) protein (240aa)
Outer membrane assembly lipoprotein YfiO id=4604390 bin=GWA2_Deltaproteo_65_63 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein Tax=GWA2_Deltaproteobacteria_65_63_curated
outer membrane assembly lipoprotein YfiO
GWC2_DPX2_66_88_gwc2_scaffold_3050_19
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16398..18485
DNA (2088bp) protein (696aa)
Two-component hybrid sensor and response regulator histidine kinase id=2308489 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
two-component hybrid sensor and response regulator histidine kinase Tax=GWA2_Deltaproteobacteria_65_63_curated
two-component hybrid sensor and response regulator histidine kinase
GWC2_DPX2_66_88_gwc2_scaffold_3050_20
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18482..19006
DNA (525bp) protein (175aa)
Two component transcriptional regulator, LuxR family id=4272328 bin=GWC2_Deltaproteobacteria_66_88 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
LuxR family transcriptional regulator Tax=GWA2_Deltaproteobacteria_65_63_curated
LuxR family transcriptional regulator
Displaying 20 items

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