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GWC2_DPX2_66_88_gwc2_scaffold_6171

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX2_66_88_gwc2_scaffold_6171_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..89)
DNA (87bp) protein (29aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu (Fragment) id=2220940 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
translation elongation factor Tu; K02358 elongation factor Tu Tax=GWA2_Deltaproteobacteria_65_63_curated
GWC2_DPX2_66_88_gwc2_scaffold_6171_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131..2212)
DNA (2082bp) protein (694aa)
Elongation factor G id=1788714 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
fusA-3; translation elongation factor G; K02355 elongation factor G Tax=GWA2_Deltaproteobacteria_65_63_curated
fusA-3; translation elongation factor G
GWC2_DPX2_66_88_gwc2_scaffold_6171_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2246..2716)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 id=4976230 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=GWA2_Deltaproteobacteria_65_63_curated
30S ribosomal protein S7
GWC2_DPX2_66_88_gwc2_scaffold_6171_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2879..3250)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 id=1788709 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=GWA2_Deltaproteobacteria_65_63_curated
rpsL; 30S ribosomal protein S12
GWC2_DPX2_66_88_gwc2_scaffold_6171_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3544..7839)
DNA (4296bp) protein (1432aa)
rpoC; RNA polymerase, beta prime subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=GWA2_Deltaproteobacteria_65_63_curated
DNA-directed RNA polymerase subunit beta' id=1788706 bin=GWB2_Deltaproteobacteria_65_81 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rpoC; DNA-directed RNA polymerase subunit beta'
GWC2_DPX2_66_88_gwc2_scaffold_6171_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7871..11992)
DNA (4122bp) protein (1374aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=GWA2_Deltaproteobacteria_65_63_curated
DNA-directed RNA polymerase subunit beta id=4976233 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
rpoB; DNA-directed RNA polymerase subunit beta
GWC2_DPX2_66_88_gwc2_scaffold_6171_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12310..12687)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 id=1788700 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=GWA2_Deltaproteobacteria_65_63_curated
50S ribosomal protein L7/L12
GWC2_DPX2_66_88_gwc2_scaffold_6171_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12732..13265)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 id=1788699 bin=GWB2_Deltaproteobacteria_65_81 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=GWA2_Deltaproteobacteria_65_63_curated
rplJ; 50S ribosomal protein L10
GWC2_DPX2_66_88_gwc2_scaffold_6171_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13485..14186)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 id=1788698 bin=GWB2_Deltaproteobacteria_65_81 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=GWA2_Deltaproteobacteria_65_63_curated
rplA; 50S ribosomal protein L1
GWC2_DPX2_66_88_gwc2_scaffold_6171_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14417..14839)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 id=4976237 bin=GWA2_Deltaproteo_65_63 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=GWA2_Deltaproteobacteria_65_63_curated
50S ribosomal protein L11
GWC2_DPX2_66_88_gwc2_scaffold_6171_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14867..15394)
DNA (528bp) protein (176aa)
Transcription antitermination protein nusG id=4767583 bin=GWC2_Deltaproteobacteria_66_88 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=GWA2_Deltaproteobacteria_65_63_curated
antitermination protein NusG
GWC2_DPX2_66_88_gwc2_scaffold_6171_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15413..15694)
DNA (282bp) protein (94aa)
SecE id=4976239 bin=GWA2_Deltaproteo_65_63 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
secE; protein SecE; K03073 preprotein translocase subunit SecE Tax=GWA2_Deltaproteobacteria_65_63_curated
secE; protein SecE
GWC2_DPX2_66_88_gwc2_scaffold_6171_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15823..15972)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 id=1788608 bin=GWB2_Deltaproteobacteria_65_81 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=GWA2_Deltaproteobacteria_65_63_curated
rpmG; 50S ribosomal protein L33
GWC2_DPX2_66_88_gwc2_scaffold_6171_14
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15989..16069)
DNA (81bp) protein (27aa)
tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor Tu Tax=CG_Delta_02
Displaying 14 items

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