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GWC2_DPX2_66_88_gwc2_scaffold_5348

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX2_66_88_gwc2_scaffold_5348_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(291..794)
DNA (504bp) protein (168aa)
SsrA-binding protein id=4918899 bin=GWA2_Deltaproteo_65_63 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
ssrA-binding protein Tax=GWA2_Deltaproteobacteria_65_63_curated
ssrA-binding protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_2
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(815..2119)
DNA (1305bp) protein (435aa)
Amidohydrolase id=1882191 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
amidohydrolase Tax=GWA2_Deltaproteobacteria_65_63_curated
amidohydrolase
GWC2_DPX2_66_88_gwc2_scaffold_5348_3
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2213..2617)
DNA (405bp) protein (135aa)
aspartate 1-decarboxylase; K01579 aspartate 1-decarboxylase [EC:4.1.1.11] Tax=GWA2_Deltaproteobacteria_65_63_curated
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase id=1882192 bin=GWB2_Deltaproteobacteria_65_81 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWC2_DPX2_66_88_gwc2_scaffold_5348_4
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2637..3485)
DNA (849bp) protein (283aa)
pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase id=4918902 bin=GWA2_Deltaproteo_65_63 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_5348_5
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3485..4279)
DNA (795bp) protein (265aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase; K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWA2_Deltaproteobacteria_65_63_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase id=4918903 bin=GWA2_Deltaproteo_65_63 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
3-methyl-2-oxobutanoate hydroxymethyltransferase
GWC2_DPX2_66_88_gwc2_scaffold_5348_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4424..5074)
DNA (651bp) protein (217aa)
Deoxynucleoside kinase id=4918904 bin=GWA2_Deltaproteo_65_63 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
deoxynucleoside kinase Tax=GWA2_Deltaproteobacteria_65_63_curated
deoxynucleoside kinase
GWC2_DPX2_66_88_gwc2_scaffold_5348_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5113..5940)
DNA (828bp) protein (276aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=GWA2_Deltaproteobacteria_65_63_curated
Ribosomal RNA small subunit methyltransferase A id=1882196 bin=GWB2_Deltaproteobacteria_65_81 species=Saccharomonospora glauca genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rsmA; KsgA/Dim1 family 16S ribosomal RNA methyltransferase
GWC2_DPX2_66_88_gwc2_scaffold_5348_8
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5957..6955)
DNA (999bp) protein (333aa)
o-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=GWA2_Deltaproteobacteria_65_63_curated
o-sialoglycoprotein endopeptidase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=1882197 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWC2_DPX2_66_88_gwc2_scaffold_5348_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6964..8286)
DNA (1323bp) protein (441aa)
PhoH-related ATPase id=1882198 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
phenylacetate-coenzyme A ligase; K07175 PhoH-like ATPase Tax=GWA2_Deltaproteobacteria_65_63_curated
PhoH-related ATPase
GWC2_DPX2_66_88_gwc2_scaffold_5348_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8301..9158)
DNA (858bp) protein (286aa)
Tol-pal system protein YbgF id=1882199 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tol-pal system protein YbgF Tax=GWA2_Deltaproteobacteria_65_63_curated
tol-pal system protein YbgF
GWC2_DPX2_66_88_gwc2_scaffold_5348_11
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9169..9750)
DNA (582bp) protein (194aa)
Peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family id=1882200 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
OmpA domain-containing protein; K03640 peptidoglycan-associated lipoprotein Tax=GWA2_Deltaproteobacteria_65_63_curated
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
GWC2_DPX2_66_88_gwc2_scaffold_5348_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9801..11111)
DNA (1311bp) protein (437aa)
Protein TolB id=1882201 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tolB protein; K03641 TolB protein Tax=GWA2_Deltaproteobacteria_65_63_curated
tolB protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_13
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11108..11944)
DNA (837bp) protein (279aa)
TolA protein id=1882202 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tolA protein; K03832 periplasmic protein TonB Tax=GWA2_Deltaproteobacteria_65_63_curated
tolA protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_14
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11988..12404)
DNA (417bp) protein (139aa)
TolR protein id=1882203 bin=GWB2_Deltaproteobacteria_65_81 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tolR protein; K03560 biopolymer transport protein TolR Tax=GWA2_Deltaproteobacteria_65_63_curated
tolR protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_15
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12415..13152)
DNA (738bp) protein (246aa)
TolQ1 id=1882204 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
tolQ1; protein TolQ1; K03562 biopolymer transport protein TolQ Tax=GWA2_Deltaproteobacteria_65_63_curated
tolQ1; protein TolQ1
GWC2_DPX2_66_88_gwc2_scaffold_5348_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13284..13682
DNA (399bp) protein (133aa)
Transcriptional regulator, Fur family protein id=4709464 bin=GWC2_Deltaproteobacteria_66_88 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=GWA2_Deltaproteobacteria_65_63_curated
FUR family transcriptional regulator
GWC2_DPX2_66_88_gwc2_scaffold_5348_17
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13944..15308)
DNA (1365bp) protein (455aa)
gltA; type I citrate synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
type I citrate synthase (EC:2.3.3.1)
Citrate synthase id=4709465 bin=GWC2_Deltaproteobacteria_66_88 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_5348_18
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15509..18889
DNA (3381bp) protein (1127aa)
methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=GWA2_Deltaproteobacteria_65_63_curated
5-methyltetrahydrofolate--homocysteine methyltransferase (EC:2.1.1.13)
Methionine synthase id=1882212 bin=GWB2_Deltaproteobacteria_65_81 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
GWC2_DPX2_66_88_gwc2_scaffold_5348_19
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18902..19063
DNA (162bp) protein (54aa)
Rubredoxin id=1882282 bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=unknown taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
rubredoxin-type Fe(Cys)4 protein Tax=GWA2_Deltaproteobacteria_65_63_curated
rubredoxin-type Fe(Cys)4 protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_20
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19100..20899
DNA (1800bp) protein (600aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein (EC:2.1.1.10); K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=GWA2_Deltaproteobacteria_65_63_c
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein (EC:2.1.1.10)
Methylenetetrahydrofolate reductase id=4709468 bin=GWC2_Deltaproteobacteria_66_88 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
GWC2_DPX2_66_88_gwc2_scaffold_5348_21
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20970..21347
DNA (378bp) protein (126aa)
Glycine cleavage system H protein id=1882284 bin=GWB2_Deltaproteobacteria_65_81 species=Streptomyces sp. AA4 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
gcvH; glycine cleavage system H protein Tax=GWA2_Deltaproteobacteria_65_63_curated
gcvH; glycine cleavage system H protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_22
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21353..23413)
DNA (2061bp) protein (687aa)
Hypothetical conserved protein id=1882285 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_23
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23410..24348)
DNA (939bp) protein (313aa)
Hypothetical conserved protein id=4918949 bin=GWA2_Deltaproteo_65_63 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Cytochrome b(N-terminal)/b6/petB Tax=GWA2_Deltaproteobacteria_65_63_curated
Cytochrome b(N-terminal)/b6/petB
GWC2_DPX2_66_88_gwc2_scaffold_5348_24
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24571..25635)
DNA (1065bp) protein (355aa)
Formate dehydrogenase-like protein cytochrome b subunit id=1882287 bin=GWB2_Deltaproteobacteria_65_81 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Formate dehydrogenase-like protein cytochrome b subunit Tax=GWA2_Deltaproteobacteria_65_63_curated
Formate dehydrogenase-like protein cytochrome b subunit
GWC2_DPX2_66_88_gwc2_scaffold_5348_25
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25632..26327)
DNA (696bp) protein (232aa)
Deca-heme C-type cytochrome id=4918951 bin=GWA2_Deltaproteo_65_63 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein Tax=GWA2_Deltaproteobacteria_65_63_curated
hypothetical protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_26
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26324..27595)
DNA (1272bp) protein (424aa)
Formate dehydrogenase-like protein cytochrome b subunit id=1882289 bin=GWB2_Deltaproteobacteria_65_81 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Formate dehydrogenase-like protein cytochrome b subunit Tax=GWA2_Deltaproteobacteria_65_63_curated
cytochrome b subunit of formate dehydrogenase-like
GWC2_DPX2_66_88_gwc2_scaffold_5348_27
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27592..29640)
DNA (2049bp) protein (683aa)
Cytochrome b subunit of formate dehydrogenase-like protein id=4709501 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
cytochrome b subunit of formate dehydrogenase-like Tax=GWA2_Deltaproteobacteria_65_63_curated
Cytochrome b subunit of formate dehydrogenase-like protein
GWC2_DPX2_66_88_gwc2_scaffold_5348_28
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30034..31083
DNA (1050bp) protein (350aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=GWA2_Deltaproteobacteria_65_63_curated
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase alpha chain (Fragment) id=4918955 bin=GWA2_Deltaproteo_65_63 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Displaying 28 items

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