ggKbase home page

GWC2_DPX3_57_13_gwc2_scaffold_1337

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX3_57_13_gwc2_scaffold_1337_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

217..600
DNA (384bp) protein (128aa)
id=3103273 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
id=3103273 Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_1337_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(653..2218)
DNA (1566bp) protein (522aa)
ABC-type dipeptide transport system, periplasmic component id=3103275 bin=GWC2_Nitrospirae_57_13 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
dipeptide ABC transporter substrate-binding protein Tax=GWC2_Nitrospirae_57_13_curated
ABC-type transporter, periplasmic subunit
GWC2_DPX3_57_13_gwc2_scaffold_1337_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(2256..2966)
DNA (711bp) protein (237aa)
Gamma-glutamyl-gamma-aminobutyrate hydrolase id=3103421 bin=GWC2_Nitrospirae_57_13 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
peptidase C26; K07010 putative glutamine amidotransferase Tax=GWC2_Nitrospirae_57_13_curated
peptidase c26
GWC2_DPX3_57_13_gwc2_scaffold_1337_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(3236..4276)
DNA (1041bp) protein (347aa)
ornithine carbamoyltransferase (EC:2.1.3.3); K00611 ornithine carbamoyltransferase [EC:2.1.3.3] Tax=GWC2_Nitrospirae_57_13_curated
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase id=3103427 bin=GWC2_Nitrospirae_57_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4301..5494)
DNA (1194bp) protein (398aa)
acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=GWC2_Nitrospirae_57_13_curated
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase id=3103431 bin=GWC2_Nitrospirae_57_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

6077..7114
DNA (1038bp) protein (346aa)
Putative uncharacterized protein id=2006089 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Putative uncharacterized protein Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_1337_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

7192..9387
DNA (2196bp) protein (732aa)
Histidine kinase (EC:2.7.13.3) Tax=GWC2_Nitrospirae_57_13_curated
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase id=3103439 bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

9876..11189
DNA (1314bp) protein (438aa)
hom; homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=GWC2_Nitrospirae_57_13_curated
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase id=3103444 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11283..11543
DNA (261bp) protein (87aa)
SirA family protein id=3103448 bin=GWC2_Nitrospirae_57_13 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
SirA family protein Tax=GWC2_Nitrospirae_57_13_curated
SirA family protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

11572..12429
DNA (858bp) protein (286aa)
molybdenum cofactor synthesis protein 3 (Molybdopterinsynthase sulfurylase) (MPT synthase sulfurylase) (EC:6.-.-.-) Tax=GWC2_Nitrospirae_57_13_curated
molybdenum cofactor synthesis protein 3 (Molybdopterinsynthase sulfurylase) (MPT synthase sulfurylase) (EC:6.-.-.-)
Molybdopterin biosynthesis protein id=3103453 bin=GWC2_Nitrospirae_57_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

12628..13056
DNA (429bp) protein (143aa)
Mov34/MPN/PAD-1 family id=3103456 bin=GWC2_Nitrospirae_57_13 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

13127..13423
DNA (297bp) protein (99aa)
MoaD family protein id=1935250 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Hydrogenobaculum taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
MoaD family protein; K03636 molybdopterin synthase sulfur carrier subunit Tax=GWC2_Nitrospirae_57_13_curated
MoaD family protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

13499..13729
DNA (231bp) protein (77aa)
Ferredoxin id=1935247 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
ferredoxin Tax=GWC2_Nitrospirae_57_13_curated
ferredoxin
GWC2_DPX3_57_13_gwc2_scaffold_1337_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

13770..15008
DNA (1239bp) protein (413aa)
proposed homoserine kinase; K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=GWC2_Nitrospirae_57_13_curated
Proposed homoserine kinase id=1935244 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
homoserine kinase
GWC2_DPX3_57_13_gwc2_scaffold_1337_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

15193..16410
DNA (1218bp) protein (406aa)
asparate kinase, monofunctional class (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=GWC2_Nitrospirae_57_13_curated
asparate kinase (EC:2.7.2.4)
Aspartokinase id=3103468 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_16
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

16446..18074
DNA (1629bp) protein (543aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=GWC2_Nitrospirae_57_13_curated
2-isopropylmalate synthase/homocitrate synthase family protein id=1935234 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cimA; alpha-isopropylmalate/homocitrate synthase family transferase
GWC2_DPX3_57_13_gwc2_scaffold_1337_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

18355..18786
DNA (432bp) protein (144aa)
Membrane protein RseC id=3103476 bin=GWC2_Nitrospirae_57_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
positive regulator of sigma E activity; K03803 sigma-E factor negative regulatory protein RseC Tax=GWC2_Nitrospirae_57_13_curated
membrane protein RseC
GWC2_DPX3_57_13_gwc2_scaffold_1337_18
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

18845..19111
DNA (267bp) protein (89aa)
Uncharacterized protein id=1935228 bin=GWD2_Nitrospirae-related_57_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_19
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

19247..21346
DNA (2100bp) protein (700aa)
fusA1; translation elongation factor G; K02355 elongation factor G Tax=GWC2_Nitrospirae_57_13_curated
Elongation factor G id=3103481 bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
fusA1; translation elongation factor G
GWC2_DPX3_57_13_gwc2_scaffold_1337_20
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

21347..22603
DNA (1257bp) protein (419aa)
Putative protease id=3103483 bin=GWC2_Nitrospirae_57_13 species=uncultured bacterium 98 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ymxG; hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
ymxG; hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_21
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

22779..23234
DNA (456bp) protein (152aa)
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=GWC2_Nitrospirae_57_13_curated
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase id=3103485 bin=GWC2_Nitrospirae_57_13 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_1337_22
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

23308..24624
DNA (1317bp) protein (439aa)
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=3103487 bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Zn-dependent protease Tax=GWC2_Nitrospirae_57_13_curated
Zn-dependent protease
GWC2_DPX3_57_13_gwc2_scaffold_1337_23
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

24684..26030
DNA (1347bp) protein (449aa)
processing peptidase (EC:3.4.24.64) Tax=GWC2_Nitrospirae_57_13_curated
processing peptidase (EC:3.4.24.64)
Processing peptidase id=1880561 bin=GWD2_Nitrospirae-related_57_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWC2_DPX3_57_13_gwc2_scaffold_1337_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

26080..27909
DNA (1830bp) protein (610aa)
DNA mismatch repair protein MutL id=1880564 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL Tax=GWC2_Nitrospirae_57_13_curated
DNA mismatch repair protein MutL
GWC2_DPX3_57_13_gwc2_scaffold_1337_25
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

28275..28655
DNA (381bp) protein (127aa)
DNA polymerase beta domain-containing protein Tax=GWC2_Nitrospirae_57_13_curated
DNA polymerase beta domain protein region id=3103493 bin=GWC2_Nitrospirae_57_13 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA polymerase beta domain-containing protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_26
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

28652..29080
DNA (429bp) protein (143aa)
Uncharacterized protein id=3103612 bin=GWC2_Nitrospirae_57_13 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_27
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

29333..29983
DNA (651bp) protein (217aa)
hypothetical protein LkmesMB_13139 id=3103614 bin=GWC2_Nitrospirae_57_13 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_1337_28
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

30068..30457
DNA (390bp) protein (130aa)
Putative uncharacterized protein id=3103616 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
protein of unknown function DUF262 Tax=GWC2_Nitrospirae_57_13_curated
protein of unknown function DUF262
Displaying 28 items

View Taxonomy