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GWC2_DPX3_57_13_gwc2_scaffold_3353

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_DPX3_57_13_gwc2_scaffold_3353_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

257..379
DNA (123bp) protein (41aa)
Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(1212..1388)
DNA (177bp) protein (59aa)
id=4349424 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
id=4349424 Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(1516..4146)
DNA (2631bp) protein (877aa)
N-6 DNA methylase id=4349425 bin=GWC2_Nitrospirae_57_13 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
N-6 DNA methylase Tax=GWC2_Nitrospirae_57_13_curated
N-6 DNA methylase
GWC2_DPX3_57_13_gwc2_scaffold_3353_4
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4399..4776)
DNA (378bp) protein (126aa)
Predicted orf id=1935617 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_5
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4862..5695)
DNA (834bp) protein (278aa)
Putative uncharacterized protein id=1935622 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(5706..8246)
DNA (2541bp) protein (847aa)
type III restriction protein res subunit; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWC2_Nitrospirae_57_13_curated
Type III restriction protein res subunit id=4349434 bin=GWC2_Nitrospirae_57_13 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
restriction endonuclease subunit R
GWC2_DPX3_57_13_gwc2_scaffold_3353_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8398..8493)
DNA (96bp) protein (32aa)
id=1935628 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=1935628 Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8596..9129)
DNA (534bp) protein (178aa)
id=1935630 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=1935630 Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_9
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(9283..10110)
DNA (828bp) protein (276aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWC2_Nitrospirae_57_13_curated
Ribosomal RNA small subunit methyltransferase I id=4349440 bin=GWC2_Nitrospirae_57_13 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rsmI; 16S rRNA (2'-O-methyl-C1402)-methyltransferase
GWC2_DPX3_57_13_gwc2_scaffold_3353_10
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(10897..11292)
DNA (396bp) protein (132aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=GWC2_Nitrospirae_57_13_curated
Glutamine-dependent NAD(+) synthetase id=4349443 bin=GWC2_Nitrospirae_57_13 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
NAD+ synthetase
GWC2_DPX3_57_13_gwc2_scaffold_3353_11
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

12313..12645
DNA (333bp) protein (111aa)
Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(13018..13395)
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=4349446 bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(13382..14593)
DNA (1212bp) protein (404aa)
hypothetical protein; K09121 hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
UPF0272 protein CHY_1283 id=4349450 bin=GWC2_Nitrospirae_57_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_14
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(14826..15584)
DNA (759bp) protein (253aa)
NCAIR mutase-like protein id=1808465 bin=GWD2_Nitrospirae-related_57_8 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
NCAIR mutase-like protein; K06898 Tax=GWC2_Nitrospirae_57_13_curated
NCAIR mutase-like protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_15
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(15875..16987)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
Putative uncharacterized protein id=4349456 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_16
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(17162..18163)
DNA (1002bp) protein (334aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWC2_Nitrospirae_57_13_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=4349459 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
GWC2_DPX3_57_13_gwc2_scaffold_3353_17
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(18500..19150)
DNA (651bp) protein (217aa)
DSBA oxidoreductase id=1808477 bin=GWD2_Nitrospirae-related_57_8 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
DSBA oxidoreductase Tax=GWC2_Nitrospirae_57_13_curated
DSBA oxidoreductase
GWC2_DPX3_57_13_gwc2_scaffold_3353_18
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(19147..19584)
DNA (438bp) protein (146aa)
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=GWC2_Nitrospirae_57_13_curated
Probable disulfide formation protein id=1808480 bin=GWD2_Nitrospirae-related_57_8 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
disulfide bond formation protein DsbB
GWC2_DPX3_57_13_gwc2_scaffold_3353_19
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

19791..21497
DNA (1707bp) protein (569aa)
aldehyde ferredoxin oxidoreductase; K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=GWC2_Nitrospirae_57_13_curated
Aldehyde ferredoxin oxidoreductase id=4349467 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
aldehyde:ferredoxin oxidoreductase, tungsten-containing
GWC2_DPX3_57_13_gwc2_scaffold_3353_20
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

21647..22909
DNA (1263bp) protein (421aa)
id=2108941 Tax=GWC2_Nitrospirae_57_13_curated
id=2108941 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWC2_DPX3_57_13_gwc2_scaffold_3353_21
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(23115..23360)
DNA (246bp) protein (82aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
Putative uncharacterized protein id=4349498 bin=GWC2_Nitrospirae_57_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_22
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(23545..23958)
DNA (414bp) protein (138aa)
id=2108936 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
id=2108936 Tax=GWC2_Nitrospirae_57_13_curated
GWC2_DPX3_57_13_gwc2_scaffold_3353_23
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

24487..25299
DNA (813bp) protein (271aa)
Cytochrome c-type biogenesis protein CcsB id=4349502 bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cytochrome c-type biogenesis protein CcsB Tax=GWC2_Nitrospirae_57_13_curated
cytochrome c-type biogenesis protein CcsB
GWC2_DPX3_57_13_gwc2_scaffold_3353_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

25415..26737
DNA (1323bp) protein (441aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=GWC2_Nitrospirae_57_13_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase id=2108929 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
GWC2_DPX3_57_13_gwc2_scaffold_3353_25
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

26845..27813
DNA (969bp) protein (323aa)
hemC; porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=GWC2_Nitrospirae_57_13_curated
Porphobilinogen deaminase id=4349508 bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hemC; porphobilinogen deaminase
GWC2_DPX3_57_13_gwc2_scaffold_3353_26
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

27970..29499
DNA (1530bp) protein (510aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=GWC2_Nitrospirae_57_13_curated
Uroporphyrinogen-III C-methyltransferase id=4349511 bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
uroporphyrin-III C-methyltransferase
GWC2_DPX3_57_13_gwc2_scaffold_3353_27
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

29581..30012
DNA (432bp) protein (144aa)
Iron-sulfur cluster assembly accessory protein id=2108919 bin=GWD2_Nitrospirae-related_57_8 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein Tax=GWC2_Nitrospirae_57_13_curated
iron-sulfur cluster assembly accessory protein
GWC2_DPX3_57_13_gwc2_scaffold_3353_28
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

30143..31117
DNA (975bp) protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=GWC2_Nitrospirae_57_13_curated
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase id=4349519 bin=GWC2_Nitrospirae_57_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
GWC2_DPX3_57_13_gwc2_scaffold_3353_29
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

31218..31661
DNA (444bp) protein (148aa)
Putative uncharacterized protein id=4349523 bin=GWC2_Nitrospirae_57_13 species=Thiorhodospira sibirica genus=Thiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
hypothetical protein
Displaying 29 items

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