ggKbase home page

GWC2_NC10X_70_16_gwc2_scaffold_4518

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_16_gwc2_scaffold_4518_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
TRAP transporter solute receptor id=4600691 bin=GWC2_Methylomirabilis_70_16 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP transporter solute receptor; K07080 Tax=GWC2_Rokubacteria_70_16_curated
TRAP transporter solute receptor
GWC2_NC10X_70_16_gwc2_scaffold_4518_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(338..1285)
DNA (948bp) protein (316aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100 3.8.1.9) Tax=GWC2_Rokubacteria_70_16_curated
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100 3.8.1.9)
Putative uncharacterized protein id=4600695 bin=GWC2_Methylomirabilis_70_16 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_16_gwc2_scaffold_4518_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1349..1750)
DNA (402bp) protein (134aa)
id=4600698 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4600698 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_4518_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2130..5396
DNA (3267bp) protein (1089aa)
Adenylate/guanylate cyclase id=4600699 bin=GWC2_Methylomirabilis_70_16 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenylate/guanylate cyclase Tax=GWC2_Rokubacteria_70_16_curated
adenylate/guanylate cyclase
GWC2_NC10X_70_16_gwc2_scaffold_4518_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5423..6424
DNA (1002bp) protein (334aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] Tax=GWC2_Rokubacteria_70_16_curated
Alcohol dehydrogenase GroES domain protein id=4600702 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alcohol dehydrogenase
GWC2_NC10X_70_16_gwc2_scaffold_4518_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6435..6929)
DNA (495bp) protein (165aa)
id=4600705 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4600705 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_4518_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7071..7223)
DNA (153bp) protein (51aa)
id=4600707 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4600707 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_4518_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7339..8733)
DNA (1395bp) protein (465aa)
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster id=4600709 bin=GWC2_Methylomirabilis_70_16 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8730..9047)
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=4600712 bin=GWC2_Methylomirabilis_70_16 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
GWC2_NC10X_70_16_gwc2_scaffold_4518_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9034..9816)
DNA (783bp) protein (261aa)
putative oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase id=4600716 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10273..10785)
DNA (513bp) protein (171aa)
FAD dependent oxidoreductase id=4600722 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(10743..11231)
DNA (489bp) protein (163aa)
ABC transporter; permease component id=4600729 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter permease
GWC2_NC10X_70_16_gwc2_scaffold_4518_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11228..12343)
DNA (1116bp) protein (372aa)
FAD dependent oxidoreductase id=4600733 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12340..12906)
DNA (567bp) protein (189aa)
Transcriptional regulator, Cro/CI family id=4600739 bin=GWC2_Methylomirabilis_70_16 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Cro/CI family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
Cro/CI family transcriptional regulator
GWC2_NC10X_70_16_gwc2_scaffold_4518_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12922..13695)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase sdr id=4600742 bin=GWC2_Methylomirabilis_70_16 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase sdr Tax=GWC2_Rokubacteria_70_16_curated
short-chain dehydrogenase/reductase sdr
GWC2_NC10X_70_16_gwc2_scaffold_4518_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13897..15861)
DNA (1965bp) protein (655aa)
NADH:flavin oxidoreductase/NADH oxidase; K00219 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] Tax=GWC2_Rokubacteria_70_16_curated
NADH:flavin oxidoreductase/NADH oxidase id=4600745 bin=GWC2_Methylomirabilis_70_16 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADH:flavin oxidoreductase/NADH oxidase
GWC2_NC10X_70_16_gwc2_scaffold_4518_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16107..16940)
DNA (834bp) protein (278aa)
alpha/beta hydrolase fold protein Tax=GWC2_Rokubacteria_70_16_curated
Putative GntR-family transcriptional regulator id=4600748 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces venezuelae genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha/beta hydrolase fold protein
GWC2_NC10X_70_16_gwc2_scaffold_4518_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17170..17901)
DNA (732bp) protein (244aa)
putative GntR-family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
Putative GntR-family transcriptional regulator id=4600748 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces venezuelae genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
GWC2_NC10X_70_16_gwc2_scaffold_4518_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17891..19249)
DNA (1359bp) protein (453aa)
thiamine pyrophosphate enzyme-like protein; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=GWC2_Rokubacteria_70_16_curated
Phenylglyoxylate:acceptor oxidoreductase PadI subunit id=4600836 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
thiamine pyrophosphate enzyme-like protein
GWC2_NC10X_70_16_gwc2_scaffold_4518_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19249..20505)
DNA (1257bp) protein (419aa)
NADH dependant phenylglyoxylate id=4600837 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NADH dependent phenylglyoxylate Tax=GWC2_Rokubacteria_70_16_curated
NADH dependent phenylglyoxylate
GWC2_NC10X_70_16_gwc2_scaffold_4518_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20509..21693)
DNA (1185bp) protein (395aa)
padG1; phenylglyoxylate:acceptor oxidoreductase subunit G PadG1 (EC:1.2.1.58) Tax=GWC2_Rokubacteria_70_16_curated
padG1; phenylglyoxylate:acceptor oxidoreductase subunit G PadG1 (EC:1.2.1.58)
Putative uncharacterized protein id=4600838 bin=GWC2_Methylomirabilis_70_16 species=Clostridium hylemonae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_16_gwc2_scaffold_4518_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21690..21962)
DNA (273bp) protein (91aa)
pyruvate:ferredoxin oxidoreductase subunit delta; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=GWC2_Rokubacteria_70_16_curated
Pyruvate oxidoreductase, delta chain id=4600839 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyruvate:ferredoxin oxidoreductase subunit delta
GWC2_NC10X_70_16_gwc2_scaffold_4518_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(21949..22518)
DNA (570bp) protein (190aa)
pyruvate/ketoisovalerate oxidoreductase subunit gamma; K00172 pyruvate ferredoxin oxidoreductase, gamma subunit [EC:1.2.7.1] Tax=GWC2_Rokubacteria_70_16_curated
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit id=4600840 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyruvate/ketoisovalerate oxidoreductase subunit gamma
GWC2_NC10X_70_16_gwc2_scaffold_4518_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(22529..23428)
DNA (900bp) protein (300aa)
Probable membrane anchor for molybdopterin oxidoreductase PadBC2, id=4600841 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
padX2; membrane anchor for molybdopterin oxidoreductase PadBC2 Tax=GWC2_Rokubacteria_70_16_curated
padX2; membrane anchor for molybdopterin oxidoreductase PadBC2
GWC2_NC10X_70_16_gwc2_scaffold_4518_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(23444..24049)
DNA (606bp) protein (202aa)
padC2; molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=GWC2_Rokubacteria_70_16
Molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase id=4600842 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
padC2; molybdenum enzyme, medium subunit,related to phenylacetyl-CoA: acceptor oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(24046..26646)
DNA (2601bp) protein (867aa)
padB2; molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=GWC2_Rokubacteria_70_1
Molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase id=4600843 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
padB2; molybdenum enzyme, large subunit,related to phenylacetyl-CoA: acceptor oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_4518_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(26674..26988)
DNA (315bp) protein (105aa)
id=4600844 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4600844 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_4518_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

27493..27966
DNA (474bp) protein (158aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4600845 bin=GWC2_Methylomirabilis_70_16 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
extracellular ligand-binding receptor
Displaying 28 items

View Taxonomy