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GWC2_NC10X_70_16_gwc2_scaffold_3315

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_16_gwc2_scaffold_3315_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..478
DNA (477bp) protein (159aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWC2_Rokubacteria_70_16_curated
Heme/copper-type cytochrome/quinol oxidase, subunit 1 id=4342108 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Heme/copper-type cytochrome/quinol oxidase, subunit 1
GWC2_NC10X_70_16_gwc2_scaffold_3315_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

488..1948
DNA (1461bp) protein (487aa)
Putative cytochrome c oxidase, subunit I id=4342109 bin=GWC2_Methylomirabilis_70_16 species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative cytochrome c oxidase subunit I Tax=GWC2_Rokubacteria_70_16_curated
cytochrome c oxidase subunit I
GWC2_NC10X_70_16_gwc2_scaffold_3315_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1945..2814
DNA (870bp) protein (290aa)
polyprenyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=GWC2_Rokubacteria_70_16_curated
ctaB; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=4342110 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_16_gwc2_scaffold_3315_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2863..4485
DNA (1623bp) protein (541aa)
nirS; nitrite reductase, cytochrome cd1 type (EC:1.7.2.1) Tax=GWC2_Rokubacteria_70_16_curated
nirS; nitrite reductase, cytochrome cd1 type (EC:1.7.2.1)
Nitrite reductase, cytochrome cd1 type id=4342111 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_16_gwc2_scaffold_3315_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4766..6352
DNA (1587bp) protein (529aa)
Sensor histidine kinase, HAMP domain-containing id=4342112 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAMP domain-containing sensor histidine kinase Tax=GWC2_Rokubacteria_70_16_curated
HAMP domain-containing sensor histidine kinase
GWC2_NC10X_70_16_gwc2_scaffold_3315_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6356..7705
DNA (1350bp) protein (450aa)
Transcriptional regulatory protein id=4342167 bin=GWC2_Methylomirabilis_70_16 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulatory protein Tax=GWC2_Rokubacteria_70_16_curated
transcriptional regulatory protein
GWC2_NC10X_70_16_gwc2_scaffold_3315_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7953..8333
DNA (381bp) protein (127aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4342168 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_3315_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8330..8929
DNA (600bp) protein (200aa)
Putative cytochrome c id=4342169 bin=GWC2_Methylomirabilis_70_16 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative cytochrome c Tax=GWC2_Rokubacteria_70_16_curated
putative cytochrome c
GWC2_NC10X_70_16_gwc2_scaffold_3315_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8939..11353
DNA (2415bp) protein (805aa)
molybdopterin oxidoreductase Fe4S4 region; K00183 molybdopterin oxidoreductase, molybdopterin binding subunit [EC:1.2.7.-] Tax=GWC2_Rokubacteria_70_16_curated
Molybdopterin oxidoreductase id=4342170 bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin oxidoreductase Fe4S4 region
GWC2_NC10X_70_16_gwc2_scaffold_3315_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11487..12170
DNA (684bp) protein (228aa)
4Fe-4S ferredoxin; K00184 molybdopterin oxidoreductase, iron-sulfur binding subunit [EC:1.2.7.-] Tax=GWC2_Rokubacteria_70_16_curated
Molybdopterin oxidoreductase iron-sulfur binding subunit id=4342171 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
4Fe-4S ferredoxin
GWC2_NC10X_70_16_gwc2_scaffold_3315_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

12163..13515
DNA (1353bp) protein (451aa)
polysulfide reductase NrfD; K00185 molybdopterin oxidoreductase, membrane subunit [EC:1.2.7.-] Tax=GWC2_Rokubacteria_70_16_curated
Polysulfide reductase NrfD id=4342172 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
actC; menaquinol oxidoreductase complex ACIII, menaquinol-binding membrane protein subunit ActC
GWC2_NC10X_70_16_gwc2_scaffold_3315_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13520..13840
DNA (321bp) protein (107aa)
id=4342173 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4342173 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_3315_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

13909..15156
DNA (1248bp) protein (416aa)
class I cytochrome c Tax=GWC2_Rokubacteria_70_16_curated
Cytochrome c, class I id=4342174 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
class I cytochrome c
GWC2_NC10X_70_16_gwc2_scaffold_3315_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15189..16160
DNA (972bp) protein (324aa)
Putative uncharacterized protein id=4342175 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
GWC2_NC10X_70_16_gwc2_scaffold_3315_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

16172..16999
DNA (828bp) protein (276aa)
id=4342176 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4342176 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_3315_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17087..18208)
DNA (1122bp) protein (374aa)
Radical SAM domain protein id=4342177 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fe-S oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
Fe-S oxidoreductase
GWC2_NC10X_70_16_gwc2_scaffold_3315_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

19277..20614
DNA (1338bp) protein (446aa)
Putative heme D1 biosynthesis protein (NirJ) involved in nitrite reductase biosynthesis id=4342178 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heme D1 biosynthesis protein (nirJ) involved in nitrite reductase biosynthesis Tax=GWC2_Rokubacteria_70_16_curated
heme D1 biosynthesis protein (nirJ) involved in nitrite reductase biosynthesis
GWC2_NC10X_70_16_gwc2_scaffold_3315_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

20649..21743
DNA (1095bp) protein (365aa)
Putative heme D1 biosynthesis protein (NirF), involved in nitrite reductase biosynthesis id=4342179 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
heme D1 biosynthesis protein (nirF), involved in nitrite reductase biosynthesis Tax=GWC2_Rokubacteria_70_16_curated
heme D1 biosynthesis protein (nirF), involved in nitrite reductase biosynthesis
GWC2_NC10X_70_16_gwc2_scaffold_3315_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

21746..22762
DNA (1017bp) protein (339aa)
Transcriptional regulator, AsnC family id=4342180 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AsnC family transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
AsnC family transcriptional regulator
GWC2_NC10X_70_16_gwc2_scaffold_3315_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22759..23622
DNA (864bp) protein (288aa)
uroporphyrinogen-III methylase and uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=GWC2_Rokubacteria_70_16_curated
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase id=4342181 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uroporphyrinogen-III methylase and uroporphyrinogen-III synthase
GWC2_NC10X_70_16_gwc2_scaffold_3315_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

23619..24497
DNA (879bp) protein (293aa)
Electron transport protein SCO1/SenC id=4342182 bin=GWC2_Methylomirabilis_70_16 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
electron transporter SCO1/SenC; K07152 Tax=GWC2_Rokubacteria_70_16_curated
electron transporter SCO1/SenC
GWC2_NC10X_70_16_gwc2_scaffold_3315_22
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24502..26181
DNA (1680bp) protein (560aa)
cytochrome b/b6-like Tax=GWC2_Rokubacteria_70_16_curated
Cytochrome b/b6-like protein id=4342183 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome b/b6-like
GWC2_NC10X_70_16_gwc2_scaffold_3315_23
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

26178..26723
DNA (546bp) protein (182aa)
id=4342184 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4342184 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_3315_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

26736..27659
DNA (924bp) protein (308aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=GWC2_Rokubacteria_70_16_curated
Uroporphyrinogen decarboxylase (URO-D) id=4342185 bin=GWC2_Methylomirabilis_70_16 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uroporphyrinogen decarboxylase
GWC2_NC10X_70_16_gwc2_scaffold_3315_25
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(27696..28457)
DNA (762bp) protein (254aa)
Putative uncharacterized protein id=4342186 bin=GWC2_Methylomirabilis_70_16 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
type 12 methyltransferase Tax=GWC2_Rokubacteria_70_16_curated
type 12 methyltransferase
GWC2_NC10X_70_16_gwc2_scaffold_3315_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

28503..28940
DNA (438bp) protein (146aa)
Copper resistance D id=4342187 bin=GWC2_Methylomirabilis_70_16 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
copper resistance D Tax=GWC2_Rokubacteria_70_16_curated
copper resistance D domain protein
GWC2_NC10X_70_16_gwc2_scaffold_3315_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(29350..29874)
DNA (525bp) protein (175aa)
Hemerythrin HHE cation binding domain protein id=4342188 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Hemerythrin HHE cation binding domain-containing protein Tax=GWC2_Rokubacteria_70_16_curated
Hemerythrin HHE cation binding domain-containing protein
GWC2_NC10X_70_16_gwc2_scaffold_3315_28
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(29889..30740)
DNA (852bp) protein (284aa)
Putative amidohydrolase 2 id=4342189 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. CIB genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative TIM-barrel fold metal-dependent hydrolase Tax=GWC2_Rokubacteria_70_16_curated
TIM-barrel fold metal-dependent hydrolase
GWC2_NC10X_70_16_gwc2_scaffold_3315_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30808..30987)
DNA (180bp) protein (60aa)
id=4342190 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=4342190 Tax=GWC2_Rokubacteria_70_16_curated
GWC2_NC10X_70_16_gwc2_scaffold_3315_30
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(31013..31786)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR id=4342191 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR Tax=GWC2_Rokubacteria_70_16_curated
short-chain dehydrogenase/reductase SDR
Displaying items 1-30 of 42 in total

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