ggKbase home page

GWC2_NC10X_70_24_gwc2_scaffold_16188

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_16188_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2..838
DNA (837bp) protein (279aa)
Putative transposase, IS891/IS1136/IS1341 id=3488701 bin=GWC2_Methylomirabilis_70_24 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
transposase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transposase, IS891/IS1136/IS1341
GWC2_NC10X_70_24_gwc2_scaffold_16188_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

838..2604
DNA (1767bp) protein (589aa)
zraS; two-component system sensor kinase (EC:2.7.13.3); K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] Tax=GWA2_Rokubacteria_70_23_curated
zraS; two-component system sensor kinase (EC:2.7.13.3)
Two-component system sensor kinase id=3488704 bin=GWC2_Methylomirabilis_70_24 species=Citrobacter rodentium genus=Citrobacter taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_16188_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2597..3958
DNA (1362bp) protein (454aa)
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=3488707 bin=GWC2_Methylomirabilis_70_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator Tax=GWA2_Rokubacteria_70_23_curated
response regulator
GWC2_NC10X_70_24_gwc2_scaffold_16188_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3997..5442)
DNA (1446bp) protein (482aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3488709 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5463..5891)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=3488711 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5969..6352)
DNA (384bp) protein (128aa)
Putative uncharacterized protein id=3488714 bin=GWC2_Methylomirabilis_70_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(6379..6774)
DNA (396bp) protein (132aa)
Putative cation/multidrug efflux pump of the AcrB/AcrD/AcrF family id=3488717 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cation/multidrug efflux pump of the AcrB/AcrD/AcrF family
Putative cation/multidrug efflux pump of the AcrB/AcrD/AcrF family {ECO:0000313|EMBL:CBE68983.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candid
GWC2_NC10X_70_24_gwc2_scaffold_16188_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6851..7288)
DNA (438bp) protein (146aa)
Hsp20/alpha crystallin family protein id=3488719 bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
heat shock protein Hsp20
GWC2_NC10X_70_24_gwc2_scaffold_16188_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7488..7826)
DNA (339bp) protein (113aa)
glycogen debranching enzyme GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] Tax=GWC2_Rokubacteria_70_16_curated
Glycogen debranching enzyme GlgX (EC:3.2.1.68)
Glycogen debranching enzyme GlgX id=3488721 bin=GWC2_Methylomirabilis_70_24 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_16188_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7838..9571)
DNA (1734bp) protein (578aa)
Putative HAD superfamily hydrolase id=3488723 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative HAD superfamily hydrolase Tax=GWA2_Rokubacteria_70_23_curated
putative HAD superfamily hydrolase
GWC2_NC10X_70_24_gwc2_scaffold_16188_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9872..12682
DNA (2811bp) protein (937aa)
AMP-dependent synthetase and ligase id=3488728 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12669..12872)
DNA (204bp) protein (68aa)
id=3408385 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=3408385 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_16188_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12883..13377)
DNA (495bp) protein (165aa)
Uncharacterized protein id=3408387 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13415..14605)
DNA (1191bp) protein (397aa)
Phosphoribosyltransferase id=3488730 bin=GWC2_Methylomirabilis_70_24 species=Streptomyces sp. SirexAA-E genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
phosphoribosyltransferase Tax=GWA2_Rokubacteria_70_23_curated
phosphoribosyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_16188_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14679..15317)
DNA (639bp) protein (213aa)
CBS domain containing membrane protein id=3488926 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_16188_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15317..16441)
DNA (1125bp) protein (375aa)
L-alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=GWA2_Rokubacteria_70_23_curated
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase id=3488932 bin=GWC2_Methylomirabilis_70_24 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_16188_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16523..16975)
DNA (453bp) protein (151aa)
groEL; molecular chaperone GroEL Tax=GWA2_Rokubacteria_70_23_curated
60 kDa chaperonin 5 id=3408518 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groEL; molecular chaperone GroEL
Displaying 17 items

View Taxonomy