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GWC2_NC10X_70_24_gwc2_scaffold_9954

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_9954_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..303)
DNA (303bp) protein (101aa)
Isochorismatase hydrolase id=4960484 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
isochorismatase hydrolase Tax=GWA2_Rokubacteria_70_23_curated
isochorismatase hydrolase
GWC2_NC10X_70_24_gwc2_scaffold_9954_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(325..1896)
DNA (1572bp) protein (524aa)
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=GWA2_Rokubacteria_70_23_curated
Competence ATPase ComM id=4960485 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
comM; competence ATPase ComM
GWC2_NC10X_70_24_gwc2_scaffold_9954_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2100..2402
DNA (303bp) protein (101aa)
id=4960486 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4960486 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9954_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2516..3472)
DNA (957bp) protein (319aa)
Inner-membrane translocator id=4505177 bin=GWF2_Methylomirabilis_70_14 species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator
GWC2_NC10X_70_24_gwc2_scaffold_9954_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3522..4394)
DNA (873bp) protein (291aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Inner-membrane translocator id=3772784 bin=GWC2_Methylomirabilis_70_16 species=Halorubrum saccharovorum genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
inner-membrane translocator
GWC2_NC10X_70_24_gwc2_scaffold_9954_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4397..5104)
DNA (708bp) protein (236aa)
ABC transporter related protein id=4960489 bin=GWC2_Methylomirabilis_70_24 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter family protein
GWC2_NC10X_70_24_gwc2_scaffold_9954_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5104..5808)
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein id=4960490 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter ATP-binding protein
GWC2_NC10X_70_24_gwc2_scaffold_9954_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5900..7210)
DNA (1311bp) protein (437aa)
Extracellular ligand-binding receptor id=4960491 bin=GWC2_Methylomirabilis_70_24 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family
GWC2_NC10X_70_24_gwc2_scaffold_9954_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7207..8538)
DNA (1332bp) protein (444aa)
aminotransferase class-III; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=GWA2_Rokubacteria_70_23_curated
Glutamate-1-semialdehyde 2,1-aminomutase id=4505256 bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminotransferase class-III
GWC2_NC10X_70_24_gwc2_scaffold_9954_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8983..11844)
DNA (2862bp) protein (954aa)
Adenylate and Guanylate cyclase catalytic domain protein id=4960493 bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
adenylate/guanylate cyclase Tax=GWA2_Rokubacteria_70_23_curated
adenylate/guanylate cyclase
GWC2_NC10X_70_24_gwc2_scaffold_9954_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12034..12375)
DNA (342bp) protein (114aa)
id=4960494 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4960494 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9954_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12460..13389)
DNA (930bp) protein (310aa)
Putative uncharacterized protein id=4960495 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dihydrodipicolinate synthase Tax=GWA2_Rokubacteria_70_23_curated
dihydrodipicolinate synthase
GWC2_NC10X_70_24_gwc2_scaffold_9954_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13570..13950)
DNA (381bp) protein (127aa)
UPF0102 protein CLOM621_08116 id=4960497 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
conserved hypothetical protein TIGR00252 Tax=GWA2_Rokubacteria_70_23_curated
conserved hypothetical protein TIGR00252
GWC2_NC10X_70_24_gwc2_scaffold_9954_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13983..14546)
DNA (564bp) protein (188aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=GWA2_Rokubacteria_70_23_curated
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII id=4960499 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9954_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(14620..15009)
DNA (390bp) protein (130aa)
50S ribosomal protein L19 id=4960501 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=GWA2_Rokubacteria_70_23_curated
rplS; 50S ribosomal protein L19
GWC2_NC10X_70_24_gwc2_scaffold_9954_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15025..15771)
DNA (747bp) protein (249aa)
tRNA (guanine-N(1)-)-methyltransferase id=4960503 bin=GWC2_Methylomirabilis_70_24 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tRNA (guanine-N1)-methyltransferase Tax=GWA2_Rokubacteria_70_23_curated
tRNA (guanine-N1)-methyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_9954_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15768..16304)
DNA (537bp) protein (179aa)
Ribosome maturation factor RimM id=4960505 bin=GWC2_Methylomirabilis_70_24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=GWA2_Rokubacteria_70_23_curated
16S rRNA processing protein RimM
GWC2_NC10X_70_24_gwc2_scaffold_9954_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(16385..16633)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 id=4505275 bin=GWF2_Methylomirabilis_70_14 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=GWA2_Rokubacteria_70_23_curated
30S ribosomal protein S16
GWC2_NC10X_70_24_gwc2_scaffold_9954_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(16658..18001)
DNA (1344bp) protein (448aa)
Signal recognition particle protein id=4960509 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=GWA2_Rokubacteria_70_23_curated
signal recognition particle subunit FFH/SRP54 (srp54)
GWC2_NC10X_70_24_gwc2_scaffold_9954_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18060..18722)
DNA (663bp) protein (221aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=GWA2_Rokubacteria_70_23_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=4505279 bin=GWF2_Methylomirabilis_70_14 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_9954_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18787..20145)
DNA (1359bp) protein (453aa)
hypothetical protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4960513 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9954_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20273..21220)
DNA (948bp) protein (316aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=GWA2_Rokubacteria_70_23_curated
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase id=4960515 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9954_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21246..21731)
DNA (486bp) protein (162aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=GWA2_Rokubacteria_70_23_curated
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase id=4960517 bin=GWC2_Methylomirabilis_70_24 species=Methylomicrobium album genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 23 items

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