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GWC2_NC10X_70_24_gwc2_scaffold_1543

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_1543_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..1087
DNA (1086bp) protein (362aa)
propionyl-CoA carboxylase (EC:6.4.1.3) Tax=GWC2_Rokubacteria_70_16_curated
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase id=4153737 bin=GWC2_Methylomirabilis_70_16 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_24_gwc2_scaffold_1543_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1306..2826)
DNA (1521bp) protein (507aa)
RNA polymerase sigma factor id=3388592 bin=GWC2_Methylomirabilis_70_24 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpoD; RNA polymerase sigma factor rpoD; K03086 RNA polymerase primary sigma factor Tax=GWA2_Rokubacteria_70_23_curated
rpoD; RNA polymerase sigma factor rpoD
GWC2_NC10X_70_24_gwc2_scaffold_1543_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3204..3761
DNA (558bp) protein (186aa)
CinA-like protein id=3388594 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA Tax=GWA2_Rokubacteria_70_23_curated
competence/damage-inducible protein CinA
GWC2_NC10X_70_24_gwc2_scaffold_1543_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3783..4364)
DNA (582bp) protein (194aa)
Putative uncharacterized protein id=3388596 bin=GWC2_Methylomirabilis_70_24 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
YceI family protein Tax=GWA2_Rokubacteria_70_23_curated
YceI family protein
GWC2_NC10X_70_24_gwc2_scaffold_1543_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4494..4682
DNA (189bp) protein (63aa)
malate oxidoreductase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=GWA2_Rokubacteria_70_23_curated
Malate oxidoreductase id=3388598 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
malate oxidoreductase
GWC2_NC10X_70_24_gwc2_scaffold_1543_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4695..5438
DNA (744bp) protein (248aa)
UDP-glucose--undecaprenyl-phosphate glucosyltransferase id=3388601 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
UDP-glucose--undecaprenyl-phosphate glucosyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_1543_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5435..6580
DNA (1146bp) protein (382aa)
aspartate transaminase (EC:2.6.1.1) Tax=GWA2_Rokubacteria_70_23_curated
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase id=3388775 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6708..7433
DNA (726bp) protein (242aa)
Putative uncharacterized protein id=3388778 bin=GWC2_Methylomirabilis_70_24 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_1543_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7430..9637
DNA (2208bp) protein (736aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=3388781 bin=GWC2_Methylomirabilis_70_24 species=Amycolatopsis decaplanina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_1543_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9634..10308
DNA (675bp) protein (225aa)
nth; endonuclease III (EC:4.2.99.18) Tax=GWA2_Rokubacteria_70_23_curated
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase) id=3388783 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


10399..10845
DNA (447bp) protein (149aa)
50S ribosomal protein L13 id=3388785 bin=GWC2_Methylomirabilis_70_24 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=GWA2_Rokubacteria_70_23_curated
rplM; 50S ribosomal protein L13
GWC2_NC10X_70_24_gwc2_scaffold_1543_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


10855..11250
DNA (396bp) protein (132aa)
30S ribosomal protein S9 id=3877139 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=GWA2_Rokubacteria_70_23_curated
30S ribosomal protein S9
GWC2_NC10X_70_24_gwc2_scaffold_1543_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11266..12315
DNA (1050bp) protein (350aa)
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=GWA2_Rokubacteria_70_23_curated
argC; n-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase id=3388790 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12333..13547
DNA (1215bp) protein (405aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=GWA2_Rokubacteria_70_23_curated
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ id=3388793 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


13705..14481
DNA (777bp) protein (259aa)
30S ribosomal protein S2 id=3388796 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=GWA2_Rokubacteria_70_23_curated
rpsB; 30S ribosomal protein S2
GWC2_NC10X_70_24_gwc2_scaffold_1543_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14521..15126
DNA (606bp) protein (202aa)
Elongation factor Ts id=3388800 bin=GWC2_Methylomirabilis_70_24 species=Caldisericum exile genus=Caldisericum taxon_order=Caldisericales taxon_class=Caldisericia phylum=Caldiserica tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=GWA2_Rokubacteria_70_23_curated
tsf; elongation factor Ts
GWC2_NC10X_70_24_gwc2_scaffold_1543_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15126..15875
DNA (750bp) protein (250aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=GWA2_Rokubacteria_70_23_curated
Uridylate kinase id=3388804 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pyrH; uridylate kinase
GWC2_NC10X_70_24_gwc2_scaffold_1543_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15882..16436
DNA (555bp) protein (185aa)
Ribosome-recycling factor id=3877202 bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=GWA2_Rokubacteria_70_23_curated
frr; ribosome recycling factor
GWC2_NC10X_70_24_gwc2_scaffold_1543_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16518..17300
DNA (783bp) protein (261aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=GWA2_Rokubacteria_70_23_curated
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase id=3877203 bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_1543_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17300..18166
DNA (867bp) protein (289aa)
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41) Tax=GWA2_Rokubacteria_70_23_curated
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41)
Phosphatidate cytidylyltransferase id=3388813 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18163..19368
DNA (1206bp) protein (402aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=GWA2_Rokubacteria_70_23_curated
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase id=3388816 bin=GWC2_Methylomirabilis_70_24 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19365..20726
DNA (1362bp) protein (454aa)
rseP; regulator of sigma E protease (EC:3.4.24.-); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=GWA2_Rokubacteria_70_23_curated
rseP; regulator of sigma E protease (EC:3.4.24.-)
Peptidase M50 id=3877206 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_1543_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

20779..21690
DNA (912bp) protein (304aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) Tax=GWA2_Rokubacteria_70_23_curated
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=3388820 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

21824..22156
DNA (333bp) protein (111aa)
Ferredoxin id=3388822 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ferredoxin Tax=GWA2_Rokubacteria_70_23_curated
ferredoxin
GWC2_NC10X_70_24_gwc2_scaffold_1543_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


22162..23865
DNA (1704bp) protein (568aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=GWA2_Rokubacteria_70_23_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase id=3388824 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_1543_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

23971..24465
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP id=3388826 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_1543_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

24462..25889
DNA (1428bp) protein (476aa)
Transcription elongation protein nusA (N utilization substance protein A) (L factor) id=3877216 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor) Tax=GWA2_Rokubacteria_70_23_curated
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor)
GWC2_NC10X_70_24_gwc2_scaffold_1543_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

26324..28918
DNA (2595bp) protein (865aa)
Translation initiation factor IF-2 id=3388833 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=GWA2_Rokubacteria_70_23_curated
infB; translation initiation factor IF-2
GWC2_NC10X_70_24_gwc2_scaffold_1543_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

28920..29210
DNA (291bp) protein (97aa)
Uncharacterized protein id=3388837 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_1543_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

29212..29577
DNA (366bp) protein (122aa)
Ribosome-binding factor A id=3388842 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A Tax=GWA2_Rokubacteria_70_23_curated
rbfA; ribosome-binding factor A
Displaying items 1-30 of 53 in total

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