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GWC2_NC10X_70_24_gwc2_scaffold_6218

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_6218_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..544)
DNA (543bp) protein (181aa)
Branched-chain amino acid ABC transporter, membrane protein id=4770220 bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter membrane protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(575..1819)
DNA (1245bp) protein (415aa)
Extracellular ligand-binding receptor id=3298093 bin=GWF2_Methylomirabilis_70_14 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
GWC2_NC10X_70_24_gwc2_scaffold_6218_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1842..2555)
DNA (714bp) protein (238aa)
Probable high-affinity branched-chain amino acid transport ATP-binding protein id=3298091 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
braG; high-affinity branched-chain amino acid transport ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
braG; high-affinity branched-chain amino acid transport ATP-binding protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2542..3267)
DNA (726bp) protein (242aa)
LivG-like protein id=4770223 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Pelagibacter ubique genus=Candidatus Pelagibacter taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LivG-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
LivG-like protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3284..3700)
DNA (417bp) protein (139aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=GWA2_Rokubacteria_70_23_curated
Cobalamin B12-binding domain protein id=4770224 bin=GWC2_Methylomirabilis_70_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cobalamin B12-binding domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3710..3856)
DNA (147bp) protein (49aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=3298082 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_6218_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3856..4875)
DNA (1020bp) protein (340aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) Tax=GWA2_Rokubacteria_70_23_curated
NAD dependent epimerase/dehydratase family protein id=4770226 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UDP-glucose 4-epimerase
GWC2_NC10X_70_24_gwc2_scaffold_6218_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4968..5726)
DNA (759bp) protein (253aa)
dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWA2_Rokubacteria_70_23_curated
3-ketoacyl-ACP reductase id=4770227 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium phlei genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase
GWC2_NC10X_70_24_gwc2_scaffold_6218_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5732..7753)
DNA (2022bp) protein (674aa)
NADH:flavin oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
2,4-dienoyl-CoA reductase (NADPH) id=4770228 bin=GWC2_Methylomirabilis_70_24 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NADH:flavin oxidoreductase
GWC2_NC10X_70_24_gwc2_scaffold_6218_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7710..9518)
DNA (1809bp) protein (603aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) id=4770229 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
5-oxoprolinase
GWC2_NC10X_70_24_gwc2_scaffold_6218_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9515..11551)
DNA (2037bp) protein (679aa)
hyuA; hydantoin utilization protein A; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
hyuA; hydantoin utilization protein A (EC:3.5.2.9)
Hydantoin utilization protein A id=3298069 bin=GWF2_Methylomirabilis_70_14 species=Dinoroseobacter shibae genus=Dinoroseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_6218_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11572..12279)
DNA (708bp) protein (236aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC-type branched-chain amino acid transport system, ATPase component id=3298066 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_6218_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12266..13033)
DNA (768bp) protein (256aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=4770259 bin=GWC2_Methylomirabilis_70_24 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
branched-chain amino acid ABC transporter ATP-binding protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13039..14073)
DNA (1035bp) protein (345aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
inner-membrane translocator id=4770260 bin=GWC2_Methylomirabilis_70_24 species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
GWC2_NC10X_70_24_gwc2_scaffold_6218_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14075..14944)
DNA (870bp) protein (290aa)
ABC transporter, permease protein id=4770261 bin=GWC2_Methylomirabilis_70_24 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
high-affinity branched-chain amino acid transport system permease protein
GWC2_NC10X_70_24_gwc2_scaffold_6218_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15010..16194)
DNA (1185bp) protein (395aa)
Extracellular ligand-binding receptor id=4770262 bin=GWC2_Methylomirabilis_70_24 species=Achromobacter arsenitoxydans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular ligand-binding receptor
GWC2_NC10X_70_24_gwc2_scaffold_6218_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16279..17214)
DNA (936bp) protein (312aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) Tax=GWA2_Rokubacteria_70_23_curated
Hgd; 2-(hydroxymethyl)glutarate dehydrogenase (EC:1.1.1.291)
3-hydroxyisobutyrate dehydrogenase id=4770263 bin=GWC2_Methylomirabilis_70_24 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_6218_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17291..18976)
DNA (1686bp) protein (562aa)
mutA2; methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit id=4117718 bin=GWF2_Methylomirabilis_70_14 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mutA2; methylmalonyl-CoA mutase, large subunit Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_6218_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19004..19396)
DNA (393bp) protein (131aa)
Nucleic-acid-binding protein containing a Zn-ribbon id=4770265 bin=GWC2_Methylomirabilis_70_24 species=Thermococcus barophilus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
AcaC Tax=GWA2_Rokubacteria_70_23_curated
AcaC
GWC2_NC10X_70_24_gwc2_scaffold_6218_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19393..20559)
DNA (1167bp) protein (389aa)
Thiolase id=4117722 bin=GWF2_Methylomirabilis_70_14 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thiolase Tax=GWA2_Rokubacteria_70_23_curated
Thiolase
GWC2_NC10X_70_24_gwc2_scaffold_6218_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20568..21530)
DNA (963bp) protein (321aa)
Extracellular solute-binding protein family 5 id=4770267 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
family 5 extracellular solute-binding protein
Displaying 21 items

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