ggKbase home page

GWC2_NC10X_70_24_gwc2_scaffold_18992

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_18992_1
unknown

Not on your lists

1..126
DNA (126bp) protein (42aa)

This feature has no annotations

GWC2_NC10X_70_24_gwc2_scaffold_18992_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

293..1633
DNA (1341bp) protein (447aa)
Bile acid-inducible operon protein F (BaiF-1) id=3742528 bin=GWC2_Methylomirabilis_70_24 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative acyl-CoA transferases/carnitine dehydratase Tax=GWA2_Rokubacteria_70_23_curated
putative acyl-CoA transferases/carnitine dehydratase
GWC2_NC10X_70_24_gwc2_scaffold_18992_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1630..2964
DNA (1335bp) protein (445aa)
L-carnitine dehydratase/bile acid-inducible protein F id=3061775 bin=GWF2_Methylomirabilis_70_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F Tax=GWA2_Rokubacteria_70_23_curated
L-carnitine dehydratase/bile acid-inducible protein F
GWC2_NC10X_70_24_gwc2_scaffold_18992_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2998..3375
DNA (378bp) protein (126aa)
Putative uncharacterized protein id=3742532 bin=GWC2_Methylomirabilis_70_24 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_18992_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3399..5051
DNA (1653bp) protein (551aa)
AMP-dependent synthetase and ligase id=3742534 bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_70_23_curated
AMP-dependent synthetase and ligase
GWC2_NC10X_70_24_gwc2_scaffold_18992_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5051..5386
DNA (336bp) protein (112aa)
id=3742536 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=3742536 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_18992_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5328..5762)
DNA (435bp) protein (145aa)
id=3742537 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=3742537 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_18992_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5776..6522)
DNA (747bp) protein (249aa)
ABC transporter related id=3061759 bin=GWF2_Methylomirabilis_70_14 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter
GWC2_NC10X_70_24_gwc2_scaffold_18992_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6524..7255)
DNA (732bp) protein (244aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3742541 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter-like protein
GWC2_NC10X_70_24_gwc2_scaffold_18992_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7242..8189)
DNA (948bp) protein (316aa)
ABC-type branched-chain amino acid transport system id=3742543 bin=GWC2_Methylomirabilis_70_24 species=Magnetospirillum magneticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC-type branched-chain amino acid transport system Tax=GWA2_Rokubacteria_70_23_curated
ABC-type branched-chain amino acid transport system
GWC2_NC10X_70_24_gwc2_scaffold_18992_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8189..8992)
DNA (804bp) protein (268aa)
ABC-type transporter, integral membrane subunit id=3742545 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter permease
GWC2_NC10X_70_24_gwc2_scaffold_18992_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9153..10070
DNA (918bp) protein (306aa)
BNR/Asp-box repeat protein id=3742547 bin=GWC2_Methylomirabilis_70_24 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
BNR/Asp-box repeat protein Tax=GWA2_Rokubacteria_70_23_curated
BNR/Asp-box repeat family protein
GWC2_NC10X_70_24_gwc2_scaffold_18992_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10092..10229)
DNA (138bp) protein (46aa)
id=3742548 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Extracellular ligand-binding receptor Tax=GWA2_Rokubacteria_70_23_curated
Displaying 13 items

View Taxonomy