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GWC2_NC10X_70_24_gwc2_scaffold_9657

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_9657_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..867)
DNA (867bp) protein (289aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
hydantoinase B/oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4367858 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_24_gwc2_scaffold_9657_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1495..2073)
DNA (579bp) protein (193aa)
Uncharacterized protein id=4948617 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2070..2648)
DNA (579bp) protein (193aa)
Uncharacterized protein id=4948618 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2745..2954)
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4704586 bin=GWC2_Methylomirabilis_70_16 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_24_gwc2_scaffold_9657_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3038..4426)
DNA (1389bp) protein (463aa)
hsdR; type I site-specific deoxyribonuclease R; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=GWA2_Rokubacteria_70_23_curated
Type I site-specific deoxyribonuclease protein R id=4948620 bin=GWC2_Methylomirabilis_70_24 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hsdR; type I site-specific deoxyribonuclease R
GWC2_NC10X_70_24_gwc2_scaffold_9657_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5516..5698)
DNA (183bp) protein (61aa)
id=4948622 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4948622 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9657_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5695..6357)
DNA (663bp) protein (221aa)
Uncharacterized protein id=4948623 bin=GWC2_Methylomirabilis_70_24 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7483..8193
DNA (711bp) protein (237aa)
HNH endonuclease id=4948624 bin=GWC2_Methylomirabilis_70_24 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HNH endonuclease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HNH endonuclease
GWC2_NC10X_70_24_gwc2_scaffold_9657_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8249..8497)
DNA (249bp) protein (83aa)
Fic family protein id=4948625 bin=GWC2_Methylomirabilis_70_24 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8499..9677)
DNA (1179bp) protein (393aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Restriction modification system DNA specificity domain id=4948626 bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
restriction modification system DNA specificity subunit Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9657_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9674..10942)
DNA (1269bp) protein (423aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=GWA2_Rokubacteria_70_23_curated
N-6 DNA methylase id=4948628 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-6 DNA methylase
GWC2_NC10X_70_24_gwc2_scaffold_9657_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11228..11392)
DNA (165bp) protein (55aa)
id=4948630 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4948630 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9657_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11565..11783)
DNA (219bp) protein (73aa)
Hypothetical conserved protein id=4948631 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11773..12033)
DNA (261bp) protein (87aa)
Hypothetical conserved protein id=4948633 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12226..13455)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein id=4948635 bin=GWC2_Methylomirabilis_70_24 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13394..14791)
DNA (1398bp) protein (466aa)
Type III restriction protein res subunit id=4948637 bin=GWC2_Methylomirabilis_70_24 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
type III restriction protein res subunit Tax=GWA2_Rokubacteria_70_23_curated
type III restriction protein res subunit
GWC2_NC10X_70_24_gwc2_scaffold_9657_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14875..15201)
DNA (327bp) protein (109aa)
Ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Tax=GWA2_Rokubacteria_70_23_curated
Ribonuclease H id=4948639 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ribonuclease H
GWC2_NC10X_70_24_gwc2_scaffold_9657_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15354..16097)
DNA (744bp) protein (248aa)
Uncharacterized protein id=4948641 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16257..18050)
DNA (1794bp) protein (598aa)
RNA polymerase sigma factor RpoD id=3214743 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWA2_Rokubacteria_70_23_curated
rpoD; RNA polymerase sigma factor RpoD
GWC2_NC10X_70_24_gwc2_scaffold_9657_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18074..19984)
DNA (1911bp) protein (637aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=GWA2_Rokubacteria_70_23_curated
DNA primase id=3214744 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA primase
GWC2_NC10X_70_24_gwc2_scaffold_9657_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19981..22335)
DNA (2355bp) protein (785aa)
MutS2 protein id=4948647 bin=GWC2_Methylomirabilis_70_24 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MutS2 family protein Tax=GWA2_Rokubacteria_70_23_curated
MutS2 family protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22368..22562)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 id=3716356 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsU; 30S ribosomal protein S21 Tax=GWA2_Rokubacteria_70_23_curated
rpsU; 30S ribosomal protein S21
GWC2_NC10X_70_24_gwc2_scaffold_9657_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(22681..23238)
DNA (558bp) protein (186aa)
Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=4948651 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Peptidyl-tRNA hydrolase Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9657_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(23239..23904)
DNA (666bp) protein (222aa)
50S ribosomal protein L25 id=4948653 bin=GWC2_Methylomirabilis_70_24 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=GWA2_Rokubacteria_70_23_curated
rplY; 50S ribosomal protein L25
GWC2_NC10X_70_24_gwc2_scaffold_9657_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(23927..24865)
DNA (939bp) protein (313aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1) Tax=GWA2_Rokubacteria_70_23_curated
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=4948655 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9657_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(24972..25832)
DNA (861bp) protein (287aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=GWA2_Rokubacteria_70_23_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase id=3716360 bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
GWC2_NC10X_70_24_gwc2_scaffold_9657_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(25900..26550)
DNA (651bp) protein (217aa)
id=4948659 Tax=GWA2_Rokubacteria_70_23_curated
id=4948659 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9657_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(26657..28447)
DNA (1791bp) protein (597aa)
Putative TPR domain protein id=4948660 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TPR domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
TPR domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_9657_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(28444..28953)
DNA (510bp) protein (170aa)
id=4948662 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4948662 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_9657_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

29069..30658
DNA (1590bp) protein (530aa)
trmA; protein TrmA; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWA2_Rokubacteria_70_23_curated
RNA methyltransferase, trma family protein id=4948663 bin=GWC2_Methylomirabilis_70_24 species=Paenibacillus peoriae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RNA methyltransferase
Displaying items 1-30 of 35 in total

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