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GWC2_NC10X_70_24_gwc2_scaffold_4563

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_4563_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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68..361
DNA (294bp) protein (98aa)
Putative uncharacterized protein id=2650583 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
plasmid stabilization system Tax=GWA2_Rokubacteria_70_23_curated
plasmid stabilization system
GWC2_NC10X_70_24_gwc2_scaffold_4563_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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598..1554
DNA (957bp) protein (319aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_70_23_curated
pseudouridine synthase id=4608907 bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RluA family pseudouridine synthase
GWC2_NC10X_70_24_gwc2_scaffold_4563_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1670..3079
DNA (1410bp) protein (470aa)
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase id=4608909 bin=GWC2_Methylomirabilis_70_24 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_4563_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3230..5068
DNA (1839bp) protein (613aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16) Tax=GWA2_Rokubacteria_70_23_curated
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=2650591 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_4563_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5139..7331
DNA (2193bp) protein (731aa)
uvrD; DNA helicase II (EC:3.6.1.-) Tax=GWA2_Rokubacteria_70_23_curated
uvrD; DNA helicase II (EC:3.6.1.-)
DNA helicase II id=4608913 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_4563_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7328..7627
DNA (300bp) protein (100aa)
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-) Tax=GWA2_Rokubacteria_70_23_curated
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=4608915 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_4563_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7631..9100
DNA (1470bp) protein (490aa)
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-) Tax=GWA2_Rokubacteria_70_23_curated
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=4608917 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_4563_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9223..10671
DNA (1449bp) protein (483aa)
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-) Tax=GWA2_Rokubacteria_70_23_curated
gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=4608919 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_4563_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10698..11369
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE id=2650604 bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cell division ATP-binding protein FtsE Tax=GWA2_Rokubacteria_70_23_curated
cell division ATP-binding protein FtsE
GWC2_NC10X_70_24_gwc2_scaffold_4563_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11376..12260
DNA (885bp) protein (295aa)
Putative Cell division protein FtsX id=4608922 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Cell division protein FtsX Tax=GWA2_Rokubacteria_70_23_curated
Cell division protein FtsX
GWC2_NC10X_70_24_gwc2_scaffold_4563_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12257..13471
DNA (1215bp) protein (405aa)
Uncharacterized protein id=4608923 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_4563_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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13504..14799
DNA (1296bp) protein (432aa)
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102) Tax=GWA2_Rokubacteria_70_23_curated
ctpA; Carboxy-terminal-processing protease (C-terminal-processing protease) (EC:3.4.21.102)
Carboxy-terminal-processing protease (C-terminal-processing protease) id=4608924 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_4563_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14818..15708
DNA (891bp) protein (297aa)
Uncharacterized protein id=2650844 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K09798 hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_4563_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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15717..16718
DNA (1002bp) protein (334aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=4609024 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp) Tax=GWA2_Rokubacteria_70_23_curated
O-sialoglycoprotein endopeptidase, with actin-like ATPase domain (ygjD,gcp)
GWC2_NC10X_70_24_gwc2_scaffold_4563_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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16733..17818
DNA (1086bp) protein (362aa)
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3); K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] Tax=GWA2_Rokubacte
signal transduction histidine kinase, nitrogen specific, NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB id=2650849 bin=GWF2_Methylomirabilis_70_14 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_4563_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17829..19256
DNA (1428bp) protein (476aa)
Putative Nitrogen assimilation transcription regulatory protein (NtrC)(Synonyms:glnT, glnG) id=2650854 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWA2_Rokubacteria_70_23_curated
transcriptional regulator
GWC2_NC10X_70_24_gwc2_scaffold_4563_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(19689..21320)
DNA (1632bp) protein (544aa)
Phosphomethylpyrimidine synthase id=2650856 bin=GWF2_Methylomirabilis_70_14 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWA2_Rokubacteria_70_23_curated
thiamine biosynthesis protein thic
GWC2_NC10X_70_24_gwc2_scaffold_4563_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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21637..22404
DNA (768bp) protein (256aa)
Putative transcriptional regulator id=4609028 bin=GWC2_Methylomirabilis_70_24 species=Kitasatospora setae genus=Kitasatospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
putative transcriptional regulator
Displaying 18 items

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