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GWC2_NC10X_70_24_gwc2_scaffold_8073

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_8073_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..737)
DNA (735bp) protein (245aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWA2_Rokubacteria_70_23_curated
UDP-3-O-acylglucosamine N-acyltransferase id=4879945 bin=GWC2_Methylomirabilis_70_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_8073_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(738..1304)
DNA (567bp) protein (189aa)
Putative Outer membrane chaperone Skp (OmpH) id=4879946 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Outer membrane chaperone Skp (OmpH) Tax=GWA2_Rokubacteria_70_23_curated
Outer membrane chaperone Skp (OmpH)
GWC2_NC10X_70_24_gwc2_scaffold_8073_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1322..3601)
DNA (2280bp) protein (760aa)
Surface antigen (D15) Tax=GWA2_Rokubacteria_70_23_curated
Outer membrane protein assembly factor BamA id=4879947 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Surface antigen (D15)
GWC2_NC10X_70_24_gwc2_scaffold_8073_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3645..6092)
DNA (2448bp) protein (816aa)
ATPase AAA; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=GWA2_Rokubacteria_70_23_curated
ATPase AAA-2 domain protein id=4000084 bin=GWF2_Methylomirabilis_70_14 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase AAA
GWC2_NC10X_70_24_gwc2_scaffold_8073_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6233..6916)
DNA (684bp) protein (228aa)
ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter related id=4879977 bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter
GWC2_NC10X_70_24_gwc2_scaffold_8073_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6909..8153)
DNA (1245bp) protein (415aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family id=4879978 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family Tax=GWA2_Rokubacteria_70_23_curated
lolC; Lipoprotein releasing system, transmembrane protein, LolC/E family
GWC2_NC10X_70_24_gwc2_scaffold_8073_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8150..9706)
DNA (1557bp) protein (519aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=GWA2_Rokubacteria_70_23_curated
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=4000090 bin=GWF2_Methylomirabilis_70_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GWC2_NC10X_70_24_gwc2_scaffold_8073_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9712..10695)
DNA (984bp) protein (328aa)
Peptide chain release factor 2 id=4000092 bin=GWF2_Methylomirabilis_70_14 species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protein PrfB; K02836 peptide chain release factor 2 Tax=GWA2_Rokubacteria_70_23_curated
protein PrfB
GWC2_NC10X_70_24_gwc2_scaffold_8073_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10804..12381)
DNA (1578bp) protein (526aa)
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-) Tax=GWA2_Rokubacteria_70_23_curated
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-)
Apolipoprotein N-acyltransferase id=4879981 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8073_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12371..13168)
DNA (798bp) protein (266aa)
hypothetical protein VspiD_13090 id=4000096 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
metallophosphoesterase Tax=GWA2_Rokubacteria_70_23_curated
metallophosphoesterase
GWC2_NC10X_70_24_gwc2_scaffold_8073_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13122..13538)
DNA (417bp) protein (139aa)
N utilization substance protein B homolog id=4879983 bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
NusB antitermination factor; K03625 N utilization substance protein B Tax=GWA2_Rokubacteria_70_23_curated
NusB antitermination factor
GWC2_NC10X_70_24_gwc2_scaffold_8073_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13545..14051)
DNA (507bp) protein (169aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=GWA2_Rokubacteria_70_23_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:6.3.3.-)
6,7-dimethyl-8-ribityllumazine synthase id=4879984 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8073_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14053..15279)
DNA (1227bp) protein (409aa)
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25) Tax=GWA2_Rokubacteria_70_23_curated
ribBA; riboflavin biosynthesis protein RibBA (EC:4.1.99.12 3.5.4.25)
Riboflavin biosynthesis protein RibBA id=4879985 bin=GWC2_Methylomirabilis_70_24 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8073_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15276..15869)
DNA (594bp) protein (198aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=GWA2_Rokubacteria_70_23_curated
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit id=4879986 bin=GWC2_Methylomirabilis_70_24 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8073_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15871..17010)
DNA (1140bp) protein (380aa)
ribD; riboflavin biosynthesis protein ribd; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] Tax=GWA2_Rokubacter
Riboflavin biosynthesis protein ribd id=4879987 bin=GWC2_Methylomirabilis_70_24 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ribD; riboflavin biosynthesis protein ribd
GWC2_NC10X_70_24_gwc2_scaffold_8073_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17007..17933)
DNA (927bp) protein (309aa)
Signal recognition particle receptor FtsY id=4879988 bin=GWC2_Methylomirabilis_70_24 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
FtsY; signal recognition particle GTPase; K03110 fused signal recognition particle receptor Tax=GWA2_Rokubacteria_70_23_curated
FtsY; signal recognition particle GTPase
GWC2_NC10X_70_24_gwc2_scaffold_8073_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17930..18718)
DNA (789bp) protein (263aa)
Transcriptional regulator, XRE family id=4879989 bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
transcriptional regulator Tax=GWC2_Rokubacteria_70_16_curated
helix-turn-helix domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_8073_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(18780..20429)
DNA (1650bp) protein (550aa)
Chromosome partition protein Smc id=2874900 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
condensin subunit Smc; K03529 chromosome segregation protein Tax=GWC2_Rokubacteria_70_16_curated
chromosome segregation protein SMC
Displaying 18 items

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