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GWC2_NC10X_70_24_gwc2_scaffold_8248

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_8248_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
HNH endonuclease id=4887992 bin=GWC2_Methylomirabilis_70_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HNH endonuclease Tax=GWA2_Rokubacteria_70_23_curated
HNH endonuclease
GWC2_NC10X_70_24_gwc2_scaffold_8248_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(941..1207)
DNA (267bp) protein (89aa)
id=4887993 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4887993 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_8248_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1750..1986
DNA (237bp) protein (79aa)
id=4887994 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4887994 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_8248_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1983..2393
DNA (411bp) protein (137aa)
Putative nucleic acid-binding protein id=4887995 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
PilT protein domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
PilT protein domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2567..2923
DNA (357bp) protein (119aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=4887996 bin=GWC2_Methylomirabilis_70_24 species=Herbaspirillum sp. YR522 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Rieske (2Fe-2S) domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
Rieske (2Fe-2S) domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3000..3482)
DNA (483bp) protein (161aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=GWA2_Rokubacteria_70_23_curated
Protein tyrosine phosphatase id=4887997 bin=GWC2_Methylomirabilis_70_24 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
protein tyrosine phosphatase
GWC2_NC10X_70_24_gwc2_scaffold_8248_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3479..4471)
DNA (993bp) protein (331aa)
Short-chain dehydrogenase/reductase SDR id=4887998 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR Tax=GWA2_Rokubacteria_70_23_curated
short-chain dehydrogenase/reductase SDR
GWC2_NC10X_70_24_gwc2_scaffold_8248_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4485..4667)
DNA (183bp) protein (61aa)
hypothetical protein MkanA1_04915 id=4887999 bin=GWC2_Methylomirabilis_70_24 species=Zymoseptoria tritici genus=Zymoseptoria taxon_order=Capnodiales taxon_class=Dothideomycetes phylum=Ascomycota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alpha/beta hydrolase Tax=GWA2_Rokubacteria_70_23_curated
alpha/beta hydrolase
GWC2_NC10X_70_24_gwc2_scaffold_8248_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4713..5501)
DNA (789bp) protein (263aa)
Redoxin domain protein id=4888000 bin=GWC2_Methylomirabilis_70_24 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
redoxin domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
redoxin domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5523..5942)
DNA (420bp) protein (140aa)
Redoxin domain protein id=4888001 bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5939..6922)
DNA (984bp) protein (328aa)
Short-chain alcohol dehydrogenase id=4888002 bin=GWC2_Methylomirabilis_70_24 species=Variovorax sp. CF313 genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase Tax=GWA2_Rokubacteria_70_23_curated
short chain dehydrogenase family protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6922..7713)
DNA (792bp) protein (264aa)
2-dehydro-3-deoxyglucarate aldolase (EC:4.1.2.-); K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-] Tax=GWA2_Rokubacteria_70_23_curated
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.52)
Oxidoreductase family protein id=4888003 bin=GWC2_Methylomirabilis_70_24 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8248_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7810..9363)
DNA (1554bp) protein (518aa)
Uncharacterized protein id=4888004 bin=GWC2_Methylomirabilis_70_24 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9371..10165)
DNA (795bp) protein (265aa)
glycosyl transferase id=4888005 bin=GWC2_Methylomirabilis_70_24 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10166..10864)
DNA (699bp) protein (233aa)
Methionine biosynthesis protein MetW id=4888033 bin=GWC2_Methylomirabilis_70_24 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glycosyl transferase family 2 Tax=GWA2_Rokubacteria_70_23_curated
glycosyl transferase family 2
GWC2_NC10X_70_24_gwc2_scaffold_8248_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10861..11001)
DNA (141bp) protein (47aa)
id=4888034 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4888034 Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_8248_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11031..11372)
DNA (342bp) protein (114aa)
Thiol-disulfide oxidoreductase domain protein id=3951912 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Thiol-disulfide oxidoreductase domain protein Tax=GWA2_Rokubacteria_70_23_curated
GWC2_NC10X_70_24_gwc2_scaffold_8248_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11398..13131)
DNA (1734bp) protein (578aa)
Glycosyl transferase family 39 id=4888036 bin=GWC2_Methylomirabilis_70_24 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glycosyl transferase family protein Tax=GWA2_Rokubacteria_70_23_curated
glycosyl transferase family protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13186..13917)
DNA (732bp) protein (244aa)
Molybdopterin binding domain protein id=4888037 bin=GWC2_Methylomirabilis_70_24 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
molybdopterin binding domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
molybdopterin binding domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14032..14850
DNA (819bp) protein (273aa)
Short-chain dehydrogenase/reductase SDR id=3951909 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase Tax=GWA2_Rokubacteria_70_23_curated
short-chain dehydrogenase
GWC2_NC10X_70_24_gwc2_scaffold_8248_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15173..15952
DNA (780bp) protein (260aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) Tax=GWA2_Rokubacteria_70_23_curated
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase id=4888039 bin=GWC2_Methylomirabilis_70_24 species=Rheinheimera nanhaiensis genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8248_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16046..16774)
DNA (729bp) protein (243aa)
Putative uncharacterized protein id=4888040 bin=GWC2_Methylomirabilis_70_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(16803..17588)
DNA (786bp) protein (262aa)
deoxyribonuclease (EC:3.1.21.-) Tax=GWA2_Rokubacteria_70_23_curated
deoxyribonuclease (EC:3.1.21.-)
Deoxyribonuclease id=4888041 bin=GWC2_Methylomirabilis_70_24 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_8248_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(17814..19151)
DNA (1338bp) protein (446aa)
Peptidase U62 id=4888042 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
pmbA; protease pmbA; K03592 PmbA protein Tax=GWA2_Rokubacteria_70_23_curated
pmbA; protease pmbA
GWC2_NC10X_70_24_gwc2_scaffold_8248_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19151..20587)
DNA (1437bp) protein (479aa)
Putative peptidase TldD id=4888043 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tldD; peptidase TldD Tax=GWA2_Rokubacteria_70_23_curated
tldD; peptidase TldD
GWC2_NC10X_70_24_gwc2_scaffold_8248_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20762..21562)
DNA (801bp) protein (267aa)
Periplasmic binding protein id=4888044 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter periplasmic ligand binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter periplasmic ligand binding protein
GWC2_NC10X_70_24_gwc2_scaffold_8248_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(21692..23023)
DNA (1332bp) protein (444aa)
amidohydrolase Tax=GWA2_Rokubacteria_70_23_curated
Amidohydrolase id=4888045 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amidohydrolase
Displaying 27 items

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