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GWC2_NC10X_70_24_gwc2_scaffold_9891_20

Organism: Candidatus Rokubacteria bacterium GWC2_70_24

near complete RP 44 / 55 MC: 2 BSCG 44 / 51 MC: 2 ASCG 11 / 38
Location: 18048..18590

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4958168 bin=GWC2_Methylomirabilis_70_24 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 181.0
  • Bit_score: 333
  • Evalue 1.50e-88
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 160.0
  • Bit_score: 326
  • Evalue 2.00e-86
ECF subfamily RNA polymerase sigma-24 similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 174.0
  • Bit_score: 135
  • Evalue 1.70e-29

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGACGTCCGGGGAGGAGGAGTTCCGCCGGGAAGCGATCCAGCACCTGGACGCGCTCCACAACCTCGCGGTCTATCTGACCCGGAACGGCTCCGAGGCCCAGGATCTGGTCCAGGAGACCTATGTCCGGGCCATGCGTTTCTCCCATCGCTTCGAGCCGGGAACCCACCTGCGGGCCTGGCTGTTTCAAATCCTGAGGAACACCTTCCTGACCTTTTACCGGCTCCGGGAGCGCGAGCCCGCGCTCTCCGAGGACGGGGTGCCGGCGGGTCGGGCGCCCATGTTCCACGATGCACCGGATTGGGACGGCGAGAGCACCGAGGCCCACACCGACCTCGAGCGGGCCCTGGCCCGGCTCCCGGAAGAGTTCAAGACCCCACTGCTGCTGGCCGAGGTCGAAGGCTTCCCCCTGGAGGACGTGGCTCGCATCATGGACTGCCCGGTGGGCACGGTGAAGTCGCGGATCTTCCGCGCCAAGGAGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCCGCTGGCTGA
PROTEIN sequence
Length: 181
VTSGEEEFRREAIQHLDALHNLAVYLTRNGSEAQDLVQETYVRAMRFSHRFEPGTHLRAWLFQILRNTFLTFYRLREREPALSEDGVPAGRAPMFHDAPDWDGESTEAHTDLERALARLPEEFKTPLLLAEVEGFPLEDVARIMDCPVGTVKSRIFRAKEXXXXXXXXXXXXXXXXSAAG*