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GWC2_NC10X_70_24_gwc2_scaffold_9891

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWC2_NC10X_70_24_gwc2_scaffold_9891_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1..552
DNA (552bp) protein (184aa)
Putative transposase, IS891/IS1136/IS1341 id=4958121 bin=GWC2_Methylomirabilis_70_24 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Putative transposase Tax=GWA2_Rokubacteria_70_23_curated
Putative transposase
GWC2_NC10X_70_24_gwc2_scaffold_9891_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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552..1787
DNA (1236bp) protein (412aa)
lysC; aspartokinase (EC:2.7.2.4) Tax=CSP1_6_Rokubacteria
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase id=4958122 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1795..2910
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase zinc-binding domain protein id=4958123 bin=GWC2_Methylomirabilis_70_24 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
alcohol dehydrogenase zinc-binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
alcohol dehydrogenase zinc-binding domain-containing protein
GWC2_NC10X_70_24_gwc2_scaffold_9891_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3069..3272
DNA (204bp) protein (68aa)
id=4958124 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=CSP1_6_Rokubacteria
GWC2_NC10X_70_24_gwc2_scaffold_9891_5
unknown

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3321..3551
DNA (231bp) protein (77aa)
id=4958125 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4958125 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3650..4105
DNA (456bp) protein (152aa)
Competence protein ComEA helix-hairpin-helix repeat protein id=4958126 bin=GWC2_Methylomirabilis_70_24 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
competence protein ComEA; K02237 competence protein ComEA Tax=GWC2_Rokubacteria_70_16_curated
competence protein ComEA
GWC2_NC10X_70_24_gwc2_scaffold_9891_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4107..6674
DNA (2568bp) protein (856aa)
Metallo-beta-lactamase superfamily Tax=GWA2_Rokubacteria_70_23_curated
Putative Metallo-beta-lactamase superfamily id=4958127 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Metallo-beta-lactamase superfamily
GWC2_NC10X_70_24_gwc2_scaffold_9891_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(6571..7572)
DNA (1002bp) protein (334aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=GWA2_Rokubacteria_70_23_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=4958128 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7714..8769
DNA (1056bp) protein (352aa)
Aminodeoxychorismate lyase id=4958129 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
aminodeoxychorismate lyase Tax=GWA2_Rokubacteria_70_23_curated
aminodeoxychorismate lyase
GWC2_NC10X_70_24_gwc2_scaffold_9891_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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8830..9570
DNA (741bp) protein (247aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=GWA2_Rokubacteria_70_23_curated
Acyltransferase id=4958130 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
1-acyl-sn-glycerol-3-phosphate acyltransferase
GWC2_NC10X_70_24_gwc2_scaffold_9891_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9596..11002
DNA (1407bp) protein (469aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=GWA2_Rokubacteria_70_23_curated
Argininosuccinate lyase id=4958131 bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
argininosuccinate lyase
GWC2_NC10X_70_24_gwc2_scaffold_9891_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11002..12081
DNA (1080bp) protein (360aa)
Putative Fibronectin, type III id=4958132 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Fibronectin, type III Tax=GWA2_Rokubacteria_70_23_curated
Fibronectin, type III
GWC2_NC10X_70_24_gwc2_scaffold_9891_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(12082..13353)
DNA (1272bp) protein (424aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=GWA2_Rokubacteria_70_23_curated
Diaminopimelate decarboxylase id=4958161 bin=GWC2_Methylomirabilis_70_24 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
diaminopimelate decarboxylase
GWC2_NC10X_70_24_gwc2_scaffold_9891_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13487..14377
DNA (891bp) protein (297aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=GWA2_Rokubacteria_70_23_curated
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase id=4801457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GWC2_NC10X_70_24_gwc2_scaffold_9891_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14391..15194
DNA (804bp) protein (268aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=GWA2_Rokubacteria_70_23_curated
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=4958163 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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15191..15949
DNA (759bp) protein (253aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase id=4958164 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase Tax=GWC2_Rokubacteria_70_16_curated
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase
GWC2_NC10X_70_24_gwc2_scaffold_9891_17
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

15960..17141
DNA (1182bp) protein (394aa)
LL-diaminopimelate aminotransferase; K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] Tax=GWA2_Rokubacteria_70_23_curated
LL-diaminopimelate aminotransferase id=4958165 bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LL-diaminopimelate aminotransferase
GWC2_NC10X_70_24_gwc2_scaffold_9891_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17153..17500
DNA (348bp) protein (116aa)
folB; dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=GWA2_Rokubacteria_70_23_curated
folB; dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase id=4958166 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17503..18051
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=GWA2_Rokubacteria_70_23_cura
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase id=4958167 bin=GWC2_Methylomirabilis_70_24 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
GWC2_NC10X_70_24_gwc2_scaffold_9891_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18048..18590
DNA (543bp) protein (181aa)
RNA polymerase sigma factor id=4958168 bin=GWC2_Methylomirabilis_70_24 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_70_23_curated
ECF subfamily RNA polymerase sigma-24
GWC2_NC10X_70_24_gwc2_scaffold_9891_21
unknown

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18641..18700
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 21 items

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